Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01730 ATGACGACGGAGAACACCGCAACAATAAACCCTACCCACCCAAAACAACCAAAAGTGGTGGTCATAACCGGCCCCACCGGCTCCGGAAAATCAAAACTCGCCGTCGATTTAGCCTCACACTTCCCCATCGAAGTAATCAACGCCGATTCCATGCAAGTCTACCGTGGCCTCGATATTCTCACCAACAAACTCCCCTTCTCTGAACAAAACGGTGTGGTGCATCATCTATTGGGTAGTGTGAATCCGAATTTGGAATTCACTGCTAAAACTTTTCGTGATTCTGCTATTCCCATTATTGATGAAATATTGTCTCGCAATCACTTACCTGTTATTGTTGGTGGTACTAATTACTATATTCAGGCTCTTGTGAGTCAGTTTCTGCTTGATGACTCGACAGATGATTTGAGTGAAAGCTATATGGCTGACTCACCTGGTATCACAGGATATGATAATAATTTTGTTGCTGAAAATGATAGTTCAAGCAACAGTTATGATTTGCTTACAGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATACATTAGTTTGTACTCTCGAACTGGTGTTCTTCCCAGCAAAGTTTTTCAAGGACAGGCTGCAGAGAAGTGGGGTCAAGCTGATAACTTAAGATATGATTGTTGTTTTATAAGTGTGGATGCATCTCTCCCAGTACTTGACAGATATGTAGAGCAGAGGGTAGATGACATGATGGATGCAGGTTTACTCAATGAAGTCTATGATATTTATACTATGAATGCAGATTACACCAGAGGTTTGCGACAGGCCATTGGTGTCCGCGAATTTGAGGATCTTCTAAGAACTAGTGTTTCCAAAAACATAAATCAGAGAGAGGGGGAATTAATTGATGGATCAAGCTTAGAAAATAGTGAGCCATTGTTTGATGGCAAATTGATGGCATGGTTGAGATCTTCCTCTGATACTAAATCCACAACTCTTTTGGAAGATGCAATTGAGAAAGTAAAGGTTAATACCAGGAGACTTGTCCGCCGTCAGAAGAGGATGCTCAGTCGACTGGAAACATTGTTTGGTTGGGACATACACTATGTTGATTCCACGGAATCAATATTAAGCAAATCAAATGATGTATGGAATAGACAAGTGGTTGAATCAGCTACAAAGATAGTAACAACATTTCTGACTGAGAATGGAAGCTTGTCGTCAACCTATGGGATGTCAAATGGCACTGGGACGAAAATAATCCAAAGGGACCTCTGGACTCAATACACATGCAAGGCCTGCAGTGATCGGGTTCTTAGAGGATTACATGAATGGGAACAACATATACGTGGTCGTGGGCATCGTAAACGTATTTCTAGTCTCAAGAGCAAGGCAAAAGGTCTTAGTTTTGTGGAAAAGAAGTGCGAGCCTTCTGAGCACGAATGCTCAGATACATTGTAG 1446 0.4129 MTTENTATINPTHPKQPKVVVITGPTGSGKSKLAVDLASHFPIEVINADSMQVYRGLDILTNKLPFSEQNGVVHHLLGSVNPNLEFTAKTFRDSAIPIIDEILSRNHLPVIVGGTNYYIQALVSQFLLDDSTDDLSESYMADSPGITGYDNNFVAENDSSSNSYDLLTDIDPVAANRIHPNNHRKINQYISLYSRTGVLPSKVFQGQAAEKWGQADNLRYDCCFISVDASLPVLDRYVEQRVDDMMDAGLLNEVYDIYTMNADYTRGLRQAIGVREFEDLLRTSVSKNINQREGELIDGSSLENSEPLFDGKLMAWLRSSSDTKSTTLLEDAIEKVKVNTRRLVRRQKRMLSRLETLFGWDIHYVDSTESILSKSNDVWNRQVVESATKIVTTFLTENGSLSSTYGMSNGTGTKIIQRDLWTQYTCKACSDRVLRGLHEWEQHIRGRGHRKRISSLKSKAKGLSFVEKKCEPSEHECSDTL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01730 481 Gene3D Classic Zinc Finger 419 464 - -
Mepo2g01730 481 Pfam IPP transferase 52 349 - -
Mepo2g01730 481 Gene3D - 151 208 - -
Mepo2g01730 481 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 394 IPR039657 -
Mepo2g01730 481 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 19 286 IPR018022 GO:0008033
Mepo2g01730 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 260 IPR027417 -
Mepo2g01730 481 Hamap tRNA dimethylallyltransferase [miaA]. 19 373 IPR018022 GO:0008033
Mepo2g01730 481 Gene3D - 17 416 IPR027417 -
Mepo2g01730 481 FunFam LD10347p 152 208 - -
Mepo2g01730 481 FunFam tRNA dimethylallyltransferase 419 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01730 Mepo-Chr2 25375945 25380691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01730 22 458 C2H2 Transcription Factor Family AT2G27760 57.370 5.01e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01730 K00791 - gmx:100792690 703.745