Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01689 ATGGCTATGATGGAGTGTGATGTAGAGGACAATAATTTCATTGAGTGGCTCAAACCATCTAATTCCTCTCAATCATATGTAACTTCATCATCATCATCTTCTTCTTCTACCACTCAAACTGAAACTATACAATTCTTTCCTATTTTGAGTGCAAAGTTTTCAAAAGATGAAGAGCGTGAAGTGCCACAAATTGAGGGTTTTGAGTTGAAAGAAGAAAAAGAGACAGTGGCTTTGCATATTGGATTACCTCATGACACTAAAAAATATTTTGATGATGAGAAGAAGTTTTTCCATGTTAAAGAAGAAGAAGAAGAAAAGTCTTCAAAAAAAACCTTCCAAAGGTTTTGGATACCAACTCCTGCACAGATCCTTGTTGGACCTATGCAATTTGCTTGCTCCATATGCAACAAAACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATTTAGGAAAGGACCAGACTCACTAAAAGGCACACAACCAGCTGCAATGCTAAGGCTACCATGCTACTGTTGTGTTCAAGGTTGCAAGAACAACATCAATCATCCAAGAGCTAAGTCTTTGAAAGACTTTAGAACTCTCCAAACTCACTACAAAAGAAAACATGGAACAAAACCATTTATATGTAGAAAATGTGGGAAAACATTTGCTGTAAAAGGTGATTGGAGGACTCATGAAAAGAATTGTGGCAAGTTATGGTATTGCACTTGTGGTTCAGATTTTAAACACAAAAGATCTCTCAAAGATCATATTAGGTCTTTTGGAAAAGGTCATCGTCGTCTTCCCTCGATTGATGATCAAGCTTTTGAGGAGGAGAAGGAATGTGTTACTGGGTCCGAAGAAGATGAATTTGCTCGTACATGA 885 0.3751 MAMMECDVEDNNFIEWLKPSNSSQSYVTSSSSSSSSTTQTETIQFFPILSAKFSKDEEREVPQIEGFELKEEKETVALHIGLPHDTKKYFDDEKKFFHVKEEEEEKSSKKTFQRFWIPTPAQILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCVQGCKNNINHPRAKSLKDFRTLQTHYKRKHGTKPFICRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHRRLPSIDDQAFEEEKECVTGSEEDEFART 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01689 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 214 234 IPR013087 -
Mepo2g01689 294 Gene3D Classic Zinc Finger 129 152 - -
Mepo2g01689 294 Pfam C2H2-type zinc finger 130 149 - -
Mepo2g01689 294 SUPERFAMILY beta-beta-alpha zinc fingers 121 153 IPR036236 -
Mepo2g01689 294 SUPERFAMILY beta-beta-alpha zinc fingers 200 234 IPR036236 -
Mepo2g01689 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Mepo2g01689 294 MobiDBLite consensus disorder prediction 20 40 - -
Mepo2g01689 294 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Mepo2g01689 294 PANTHER ZINC FINGER PROTEIN WIP2 21 281 IPR043584 GO:0003700|GO:0010468
Mepo2g01689 294 SMART c2h2final6 130 152 IPR013087 -
Mepo2g01689 294 SMART c2h2final6 176 209 IPR013087 -
Mepo2g01689 294 SMART c2h2final6 214 234 IPR013087 -
Mepo2g01689 294 Gene3D Classic Zinc Finger 189 269 - -
Mepo2g01689 294 FunFam Zinc finger protein WIP2 183 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01689 Mepo-Chr2 24845550 24849084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01689 9 284 C2H2 Transcription Factor Family AT1G08290 54.079 1.39e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g01689 zf-C2H2_6 9.2e-05 CL0361