Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01678 ATGGCTGAAACGGAGGAGCTTCCCAAAACTATCGTACGCCGTGTGGTAAAGGAGAAGCTTTCCACTTGCTCCGACGACGGCGACATTGCCGTTCACAAAGACGCTCTTCTTGCATTCTCCGAAAGTGCCAGAATCTTCATCCACTACCTTTCCGCTACGGCTAATGATATATGTAGGGAGTCAAAGAGGCAAATTATCAATGCTGAAGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTTACTGAGTTTGTTGGCCCTCTAAAAGATTCTCTTGAAGAGTTCAGGAAGAAGAACGCTGGGAAGAAAGCGGCGGTGCCAAAAGGAAAGGGAGATGAGAAGGGAAAGGGAGAGGAGAAGAAAAAGAAAAGAAAGGCGGAAGGTGAGCCATCTGATAAAGGCGATGGTGTTGATGATGACCAATGA 423 0.461 MAETEELPKTIVRRVVKEKLSTCSDDGDIAVHKDALLAFSESARIFIHYLSATANDICRESKRQIINAEDVFKALEETEFTEFVGPLKDSLEEFRKKNAGKKAAVPKGKGDEKGKGEEKKKKRKAEGEPSDKGDGVDDDQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01678 140 MobiDBLite consensus disorder prediction 95 131 - -
Mepo2g01678 140 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 5 130 - -
Mepo2g01678 140 MobiDBLite consensus disorder prediction 95 140 - -
Mepo2g01678 140 SUPERFAMILY Histone-fold 7 122 IPR009072 GO:0046982
Mepo2g01678 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Mepo2g01678 140 Gene3D Histone, subunit A 1 140 IPR009072 GO:0046982
Mepo2g01678 140 Coils Coil 58 78 - -
Mepo2g01678 140 FunFam DNA polymerase epsilon subunit 3 1 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01678 7 130 CCAAT-HAP3 Transcription Factor Family AT3G53340 30.645 1.48e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo2g01678 CBFD_NFYB_HMF 9.3e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01678 K02326 - gmx:100306382 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01678 2 24651441 24653472 Mepo2g01678 2 24651441 24653472 ECH