Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01658 ATGGAAGATATCTTCCCACCTGGTTTTCGTTTCTTCCCAACTGAAGAAGAGCTTGTTAGCTTTTATCTAAATAATAAATTACAAGGACAAACAAATGCTATAGATAGGGTTATTCCAGTCATTGACATCAATGGTGTAGAACCATGGAACCTCCCAACTCTTGCGGGAGAGCTTTGCCGCGAAGATAAAGAGCAATGGTTTTTCTTTTCACCGGGTCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACTACTGCTTGTGGGTATTGGAAGGCAACGGGTTCTCCTGGTTATGTTTATTCTTCGGATAGTAAAGTTATTGGGGTGAAAAAAACCATGGTGTTCTATAAAGGAAAAGCTCCAAGTGGAAGGAAAACAAAATGGAAGATGAATGAATACAGAGCCATTCAAGTATCTAACCAATCCAACACTGCCACACCTCAGTTGAGGAGGGAATTCAGCTTGTGTCGAGTGTATATAATATCGGGAAGTTTTCGAGCATTTGATAGACGTCCATTAGAGAGAGAAAGAGTTGATCAATTACCAGTTAATGAGATTGATCAAGATCCATTTGGTGCCACATCTACTCATCAGGATGCAACAAGTTCATTTGAAATTTCTCAATTAGGGGGACTCCAAAGTACTCATATGCAACTAGAGGTTGTAGGAGGTTCAAATAGCACTAATTGGCATGTAAATAGTAACAATGAAAATAATGGTGGTGAGGTTCAATTCCAAGAATCACTGTGGGAATGGGACAGTGAACATTTTAATTGGTCCTAA 786 0.3982 MEDIFPPGFRFFPTEEELVSFYLNNKLQGQTNAIDRVIPVIDINGVEPWNLPTLAGELCREDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDSKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRVYIISGSFRAFDRRPLERERVDQLPVNEIDQDPFGATSTHQDATSSFEISQLGGLQSTHMQLEVVGGSNSTNWHVNSNNENNGGEVQFQESLWEWDSEHFNWS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01658 261 ProSiteProfiles NAC domain profile. 5 162 IPR003441 GO:0003677|GO:0006355
Mepo2g01658 261 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Mepo2g01658 261 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Mepo2g01658 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 194 - -
Mepo2g01658 261 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01658 Mepo-Chr2 24475128 24477118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01658 1 231 NAC Transcription Factor Family AT5G22380 55.794 1.77e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g01658 NAM 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01658 - - cam:101497878 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03423 6 46399966 46401727 Mepo2g01658 2 24475128 24477118 PCT