Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01622 ATGTCGGGCACCCGAACTCCTCCCGCCGCCGCACCGGACCAGATCATGCAGCAACGTCAACTACCTTTCTCCTCCATGAAACCTCCCTTTCTCGCCGCCGGAGATTATCACCGTTTCGCACCTGACCACCGCCGGAATCAAGACCTTGAAACTGAAGCCATCGTTGTTAAAACTCCTCAATTGAAGCGGAAGAGTGAAGCAGCTGATTTTGAAGCTGATTCAGGTGATAGGATGACTCCTGGATCCACTGCAGCAGCCAATAGTTCTGTTCAGACGCCTGTATCTGGAAAGGCAGGGAAGGGAGGAAAATCTTCTAGGATGACAAAATGCAACAGATCTGGAACTCAAACCCCTGGCTCAAATATTGGTTCTCCTTCAGGAAATAATCTCACCCCTGCTGGTCCATGTCGATATGACAGCTCATTAGGTCTGTTGACAAAAAAGTTCATCGCTTTAATAAAACAAGCAGAGGATGGTATTCTTGATCTAAATAATGCTGCTGACACATTAGAGGTGCAAAAGAGGAGGATATATGATATTACAAATGTTCTTGAAGGGATTGGCCTTATAGAAAAAAAGCTCAAGAACAGAATTCAGTGGAAGGGGCTGGATGTTTCAAAACCAGGGGAGGCCGATGATAGTTTTGCTAGTTTACAGGCAGAAATTGAAAATTTAACAATTGAGGAACGCCGGTTGGATGAACAAATAAGGGAGATGCAAGAAAGACTACGGAATCTCAGTGAAGATGAAAATAATGAGAAGTTTCTTTTTGTCACTGAGGAAGATATAAAGAACTTGCCCTGCTTCCAGAATGAAACCTTGATAGCAATTAAAGCTCCACATGGTACCACTTTGGAAGTACCCGATCCTGATGAGGCCGTTGATTATCCCCAGAGAAGATACAGGATAGTCCTGAGAAGCACAATGGGCCCAATAGATGTTTACCTTGTTAGTCAATTTGAAGAGAAGTTTGAGGAGATCAACGGTGTTGATGTTGCATCCAAATTTCCACCCAGTCCAGAAGTTAACAAAGTTAACAAGGATCCATCAACCGTGGTCCCAGAAGATAAAGGGAAGGAAATAGAGGTGCAGAGACAAGATGGTGAAGGGCCTAGTTCAGATCTTACCAACAATCACGACTTCGTGAGTGGGATCATGAAGATTGTTCCTTCAGATGTTGCTAGTGATGCTGATTACTGGCTTTTATCTGATGCCGATGTTAGCATAACCGACATGTGGAGAACAGAACCTGCAGTTGAATGGAATGAACTCGAAGCACTTCAAGAAGAATATTGTATGGCTCGTGAGCAAACTACAACCCCAGATCATGCTTCAAATATTGGTGAAGTGCCTTCTGCATCCAACCCTACCGTAGGATGA 1380 0.442 MSGTRTPPAAAPDQIMQQRQLPFSSMKPPFLAAGDYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGLLTKKFIALIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAEIENLTIEERRLDEQIREMQERLRNLSEDENNEKFLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVASKFPPSPEVNKVNKDPSTVVPEDKGKEIEVQRQDGEGPSSDLTNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTEPAVEWNELEALQEEYCMAREQTTTPDHASNIGEVPSASNPTVG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01622 459 CDD E2F_DD 213 319 IPR032198 GO:0046983
Mepo2g01622 459 MobiDBLite consensus disorder prediction 60 132 - -
Mepo2g01622 459 Coils Coil 153 173 - -
Mepo2g01622 459 Gene3D - 131 204 IPR036388 -
Mepo2g01622 459 SMART E2F_TDP_2 137 202 IPR003316 GO:0005667|GO:0006355
Mepo2g01622 459 SUPERFAMILY E2F-DP heterodimerization region 216 319 IPR037241 -
Mepo2g01622 459 SUPERFAMILY "Winged helix" DNA-binding domain 137 200 IPR036390 -
Mepo2g01622 459 MobiDBLite consensus disorder prediction 106 132 - -
Mepo2g01622 459 MobiDBLite consensus disorder prediction 80 95 - -
Mepo2g01622 459 FunFam E2F transcription factor 1 131 204 - -
Mepo2g01622 459 Coils Coil 215 252 - -
Mepo2g01622 459 MobiDBLite consensus disorder prediction 437 459 - -
Mepo2g01622 459 Pfam E2F transcription factor CC-MB domain 218 318 IPR032198 GO:0046983
Mepo2g01622 459 Gene3D - 209 319 - -
Mepo2g01622 459 PANTHER TRANSCRIPTION FACTOR E2F 80 419 IPR015633 GO:0000978|GO:0006357
Mepo2g01622 459 Pfam E2F/DP family winged-helix DNA-binding domain 139 202 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01622 Mepo-Chr2 24025850 24032095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01622 18 432 E2F-DP Transcription Factor Family AT5G22220 57.631 2.63e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mepo2g01622 E2F_CC-MB 3.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01622 K06620 - gmx:100819817 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01622 2 24025850 24032095 Mepo2g01622 2 24025850 24032095 ECH