Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01607 ATGTTAAATTTTCAAATTGAAGTTTTCATCTTTTTGTTATTTTTCTGTATGATTTCAATGTCTTATGGTGAAACCAACCCAAATGATCTCAAAATTCTGAATGATTTCAAAAAAGGGTTGAAGAATTCAGAGCTTCTCAAATGGCCTGAAAATGGTAATGATCCATGTGGTTCACCTTCATGGAATTATGTGTTCTGTTCTAAAGGTAGAGTTACTCAGATTCAAGCTAAAAATCTTGGTCTTAAAGGTTCATTGCCTTCAAATTTTAACCAGCTTTCTGAGCTTCAAAATTTAGGTCTTCAAAGAAATAATCTTAGTGGAATGTTACCTAGTTTTAGTGGATTATCCAATTTGCAATATGCCTTTTTGGATTACAATGAATTTGATGCAATCCCTGTTGATTTCTTCAAAGGACTTGATAATATTCAGGTTTTGTCTTTGGAAGAAAACCCTTTGAATGCTACTAATGGTTGGTCATTTCCATTGGACTTGAAAAATTCAGCTCAATTAACAAATCTTTCTTTAGTTAATTGTAATTTGGTTGGTCCATTACCTGATTTTCTAGGCACATTGTCTTCTTTGACAAATTTGAGGCTTTCAGGAAACAGACTTTCGGGTGAAATTCCGGTTAGTTTCGGTCAATCTTCGATACAGGTTCTGTGGTTGAATGATCAACAAGGTGCTGGAATGACAGGTTCTATTGATGTTATTGCTTCAATGACATATTTGAGACAGGTTTGGTTACATGGAAACAAGTTCACCGGAACGATTCCGTCAAATATCGGGAATTTAATTTCTCTGCAAGAGCTTAACCTCAATGGTAATAAACTTGTTGGTTTGATTCCAAATTCATTGGCAAATATGGATCTTAAGTTACTTGTGTTAAATAATAATATGTTTATGGGTCCAATACCAAAGTTTAAGGCTGCAAAAGTATCTTATGATTCTAATTTCTTTTGCCAAACTAAACCTGGTCTTGATTGTGCTTCTAATGTTAATGTTCTGTTGGATTTTCTTCATAATCTGAATTATCCATCATTTCTTGTTACTCAATGGGTTGGTAATGATCCTTGTGGAGAACCATGGTTTGGGTTGAGCTGCAGTAACTCAAAGGTATCTACAATCAATTTGCCTAGACGAAAGTTTAATGGTACATTGAGTCCTTCACTTGCTATGTTAGATTCATTGCTTCAAATTAGGCTTGCAGGAAACAATATAAGTGGTAAAGTTCCTAGTAATTTTACTGAATTGAAATCATTGAGTTTGTTGGATTTGAGTGATAACGATTTGGAACCTCCATTGCCGAATTTTCGTGATGGTGTGAAGGTTATCGTTGATGGTAACCCTCTATTTGATAACCAAACTCGAATAAGTCCGGTTCCTGTTAAAAGTCCGTCACCTGTAAGTGAACCACCTTCACCACACAACGTGCCCCCATATCCGACGCCACCGCCATCACCATCTGTCGTTATTCCACCTTCCCCTAGGCAAAGTTCAAGCTCCAATCAGTCTAGGAATGTCGAATCAAATACTCAACAGAGTAACTCAAATAAATTCAAAACAGTAGCAATCGTGGCTGGAGTTGCAGTTTTTGCATTTGTAGCGGCATTGGTTATTTATCTTTTTATATGCTGTTGTGCGAAGAAAAAGAATAAAAAACACTCATTGGATGGTTCTAGATCTATCGTGGCTCAAAGTCAAGATGGATCCGATCCAAAAATGATGGTTAAATTGGCAGTGTCAGATAGCACCAACGGGAGCTTATCAACAAAGACAGGAATAAGCTCTCTGATTAACAATAGTGGCGAAACCGAAAGCTATCATGTATTTGAAGCCGGTAACTTAGTTATCTCAGTTCAAGTTCTGCGCAGGGTCACCAACAATTTCGCTTCGGAAAATGAGTTGGGCCGTGGTGGATTTGGAACGGTTTACAAAGGTGAACTTGAAAATGGAACAAAAATAGCGGTGAAAAGAATGGAATGTGGAGCTATTGGAAGCAAAGGAATCGACGAGTTTCAAGCGGAAATAGCCGTTCTTTCGAAGGTTCGGCACCGACATTTGGTATCCTTGTTAGGCTATTCTATTGAAGGAAATGAAAGGCTTTTGGTTTATGAATACATGCCTCTTGGTGCTCTAAGTAGACATCTTTTCCATTGGAAAAGCTTGAATTTGGACCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCCCTTGATGTTGCTAGAGGAATAGAATACCTTCACACTCTTGCACGACAGACGTTCATCCATCGAGACCTCAAGTCTTCAAATATTTTACTTGGAGATGATACTCGAGCTAAAGTTGCTGATTTTGGTTTGGTGAAACTTGCACCGGATGGTGAAAAGTCTATGGCAACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACGACTAAAGTGGATGTGTTCAGCTATGGTGTCGTATTGATGGAACTTCTGACCGGATTAATGGCTCTTGACGAAAGCCGACCAGAGGAAAACCGTTATTTAGCCGAATGGTTTTGGCAAATCAAATCAAACAAAGAAAAACTTATGGCTGCAATCGATCCAACACTTGAAGTAAGTGAAGAGACTTTCGAGAGTATTTCAATTGTAGCTGAACTTGCTGGACATTGCACTGCTAGGGAGGCAAACCATAGGCCAGATATGGGACATGCAGTCAAAGTGCTGTCAGAGTTAGTCGAGAAATGGCGACCAGTTGATGAAGAATTCGATTATGCTGGTGGCATTGACTTCGGTCAACCACTTCCGCAAATGTTGAAAATTTGGAAGGAAGCAGAAGGGAAAGATACAAGCTATACAAGTCTTGAAAATAGTAAAGGAAGTATACCAGCTAAACCTTCTGGTTTTGCAGATTCATTTACTTCTTCTGATGCTAGATGA 2928 0.3852 MLNFQIEVFIFLLFFCMISMSYGETNPNDLKILNDFKKGLKNSELLKWPENGNDPCGSPSWNYVFCSKGRVTQIQAKNLGLKGSLPSNFNQLSELQNLGLQRNNLSGMLPSFSGLSNLQYAFLDYNEFDAIPVDFFKGLDNIQVLSLEENPLNATNGWSFPLDLKNSAQLTNLSLVNCNLVGPLPDFLGTLSSLTNLRLSGNRLSGEIPVSFGQSSIQVLWLNDQQGAGMTGSIDVIASMTYLRQVWLHGNKFTGTIPSNIGNLISLQELNLNGNKLVGLIPNSLANMDLKLLVLNNNMFMGPIPKFKAAKVSYDSNFFCQTKPGLDCASNVNVLLDFLHNLNYPSFLVTQWVGNDPCGEPWFGLSCSNSKVSTINLPRRKFNGTLSPSLAMLDSLLQIRLAGNNISGKVPSNFTELKSLSLLDLSDNDLEPPLPNFRDGVKVIVDGNPLFDNQTRISPVPVKSPSPVSEPPSPHNVPPYPTPPPSPSVVIPPSPRQSSSSNQSRNVESNTQQSNSNKFKTVAIVAGVAVFAFVAALVIYLFICCCAKKKNKKHSLDGSRSIVAQSQDGSDPKMMVKLAVSDSTNGSLSTKTGISSLINNSGETESYHVFEAGNLVISVQVLRRVTNNFASENELGRGGFGTVYKGELENGTKIAVKRMECGAIGSKGIDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWKSLNLDPLSWSQRLAIALDVARGIEYLHTLARQTFIHRDLKSSNILLGDDTRAKVADFGLVKLAPDGEKSMATRLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEENRYLAEWFWQIKSNKEKLMAAIDPTLEVSEETFESISIVAELAGHCTAREANHRPDMGHAVKVLSELVEKWRPVDEEFDYAGGIDFGQPLPQMLKIWKEAEGKDTSYTSLENSKGSIPAKPSGFADSFTSSDAR 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01607 975 SMART LRR_typ_2 264 287 IPR003591 -
Mepo2g01607 975 SMART LRR_typ_2 191 215 IPR003591 -
Mepo2g01607 975 SMART LRR_typ_2 92 114 IPR003591 -
Mepo2g01607 975 SMART LRR_typ_2 115 138 IPR003591 -
Mepo2g01607 975 Pfam Protein tyrosine and serine/threonine kinase 632 903 IPR001245 GO:0004672|GO:0006468
Mepo2g01607 975 SUPERFAMILY L domain-like 26 307 - -
Mepo2g01607 975 MobiDBLite consensus disorder prediction 454 515 - -
Mepo2g01607 975 ProSiteProfiles Protein kinase domain profile. 629 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01607 975 MobiDBLite consensus disorder prediction 464 492 - -
Mepo2g01607 975 FunFam Leucine-rich repeat receptor-like kinase 330 454 - -
Mepo2g01607 975 Pfam Leucine rich repeat N-terminal domain 332 368 IPR013210 -
Mepo2g01607 975 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mepo2g01607 975 SMART serkin_6 629 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01607 975 MobiDBLite consensus disorder prediction 493 515 - -
Mepo2g01607 975 Gene3D Phosphorylase Kinase; domain 1 591 706 - -
Mepo2g01607 975 FunFam receptor protein kinase TMK1 707 924 - -
Mepo2g01607 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Mepo2g01607 975 FunFam receptor protein kinase TMK1 591 706 - -
Mepo2g01607 975 SUPERFAMILY L domain-like 330 436 - -
Mepo2g01607 975 Gene3D Transferase(Phosphotransferase) domain 1 707 920 - -
Mepo2g01607 975 FunFam Receptor-like kinase TMK4 27 325 - -
Mepo2g01607 975 MobiDBLite consensus disorder prediction 948 975 - -
Mepo2g01607 975 SUPERFAMILY Protein kinase-like (PK-like) 603 905 IPR011009 -
Mepo2g01607 975 CDD STKc_IRAK 635 908 - -
Mepo2g01607 975 Gene3D Ribonuclease Inhibitor 27 325 IPR032675 -
Mepo2g01607 975 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Mepo2g01607 975 Gene3D Ribonuclease Inhibitor 330 453 IPR032675 -
Mepo2g01607 975 PANTHER OSJNBA0070M12.3 PROTEIN 9 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01607 Mepo-Chr2 23896713 23900550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01607 83 917 Receptor kinase-like Gene Family AT1G55610 30.079 3.35e-81 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo2g01607 PK_Tyr_Ser-Thr 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01607 - - cam:101505581 1526.53