Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01588 ATGACAGGCATAACATACGATAGAAAAAGCATTGAAAAATGGTTAATGAAAGCCAAAATTTGTGTGTGTCCGGTAACAAATCAATCACTACCAAGAAGTTCAGAGTATTTGACTCCAAATCACACACTTCAAAGGCTAATCAAAGCATGGATTTTATCAAATGAAGCCAAAGTGGTTGATAGTCAAATTCAATCTCCAAAATCTCCTCTCAATAGAATCCATCTTCAAAAACTTGTCAAGAATCTTGAGCTTCCTAATTGCTTTCAAGCATCAATGGAGAATATTCTTGAACTTGCTAAACAAAGTGAGAGAAATAGAATATGCATGGTTGAAGTAGGTGTAACAAAGGCTATAGTTATGATGATTAAAAAGAAATTCAAAGAAGGAAACACCAATGATTTAGAAGAAGGTTTGAAAATTATTCGTCTTTTGTGGAATGAAGCAATGATCAACAACATGATGAAGCCTTTGGTTGGCAAAAACATGGATTTCATCAATTCCTTGACTTGGATTTTGAAAATTTACATTGATACCAATAATTTTGAGAAGGTAAATGAAGTCATGCTATTATTAAAGTCGACAATTGATGTTGTGGACTCGAACCTTTTAGGAAATTTAAACATTGAATTCTTTGTCACAATGGTTAGAGTACTTAGAAAGAGAGGATTATTCTCCAAACAAGCTATTAAATCAGCGTTATACGTGCTTATAGAGACGTGCCCGTTGGGTAGAAACCGAACAAAGATCGTGGAAGCGGGTGGAATAACCGAACTCATTGAACTTGAGGTTGAAAAACCGGAGAAGAATGTGACTGAGCTTGTGTTCAATCTTTTGGCACATTTGTGTTCGTGCGCGGATGGAAGAGAACAATTTTTGAGGCATGCCGCGGGCATAGCGATGATATCGAAGAGGATTTTGAGGGTTTCAGCCGCAACCGATGACCTAGCGATTCAAGTAATTTCAGTGATTGCAAAGAATTCAACGTCGAAAGAGTTTATTTTTGAGATGTTGCAAGTTGGAGCGGTTTCCAAGCTTTGCATGGTAATGCAAGCGGATTGTGCTTCTTATTTGAAAGAGAAAGCAAGAGACATACTTAGGTTACACTCCACTACTTGGAATAATTCTCCATGCATACAATTGTACTTGTTAACAAGGCACCAAAGGTGA 1167 0.3693 MTGITYDRKSIEKWLMKAKICVCPVTNQSLPRSSEYLTPNHTLQRLIKAWILSNEAKVVDSQIQSPKSPLNRIHLQKLVKNLELPNCFQASMENILELAKQSERNRICMVEVGVTKAIVMMIKKKFKEGNTNDLEEGLKIIRLLWNEAMINNMMKPLVGKNMDFINSLTWILKIYIDTNNFEKVNEVMLLLKSTIDVVDSNLLGNLNIEFFVTMVRVLRKRGLFSKQAIKSALYVLIETCPLGRNRTKIVEAGGITELIELEVEKPEKNVTELVFNLLAHLCSCADGREQFLRHAAGIAMISKRILRVSAATDDLAIQVISVIAKNSTSKEFIFEMLQVGAVSKLCMVMQADCASYLKEKARDILRLHSTTWNNSPCIQLYLLTRHQR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01588 388 PANTHER WDSAM1 PROTEIN 2 379 IPR045185 GO:0061630
Mepo2g01588 388 SMART Ubox_2 2 50 IPR003613 GO:0004842|GO:0016567
Mepo2g01588 388 SUPERFAMILY RING/U-box 2 59 - -
Mepo2g01588 388 ProSiteProfiles U-box domain profile. 1 57 IPR003613 GO:0004842|GO:0016567
Mepo2g01588 388 SUPERFAMILY ARM repeat 87 355 IPR016024 -
Mepo2g01588 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 67 IPR013083 -
Mepo2g01588 388 Pfam U-box domain 3 55 IPR003613 GO:0004842|GO:0016567
Mepo2g01588 388 Gene3D - 74 373 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01588 Mepo-Chr2 23669780 23670946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01588 1 385 U-box Gene Family AT3G11840 34.426 4.87e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01588 - - lang:109351746 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03453 6 46662915 46664144 Mepo2g01588 2 23669780 23670946 PCT