Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01567 ATGTCAATGGAAATGATTGCAACAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTAAATGTTCCATACAGCAGTTTGTTAACCATAGTAACAGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGTGGCACCATTACTTCAGCCATTTCCTCCTCCTCAACTTCCTCAGCCACAGAAACAGCACATAATTGATGAAGAACCAAGCAGCAAGGAAATTGGATCATCATCTTCAAAATGCAACAAAATAGCATCATTTGAGGCAGTAGTAGAGCACGAACATCCTAGGATTCCTCCCATTCGTCCTATAGAGAAAAGACATCGTGTTCCTTCAGCTTACAACCGGTTCATTAAGGAGGAAATTCAAAGGATTAAGGCCAGTAATCCAGATATCAGCCACAGGGAAGCTTTCAGCTCAGCAGCAAAAAATTGGGCACATTTCCCTCATATTCACTTTGGGAAGCAGCAAGCAAAGTTGGATCATGGTGAAGGGACTCGTGAAAAGACTAATGGATTCTAG 546 0.4158 MSMEMIATERVCYVHCNFCNTILAVNVPYSSLLTIVTVRCGHCANLLSVNMVAPLLQPFPPPQLPQPQKQHIIDEEPSSKEIGSSSSKCNKIASFEAVVEHEHPRIPPIRPIEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGKQQAKLDHGEGTREKTNGF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01567 181 CDD HMG-box_SF 117 153 - -
Mepo2g01567 181 PANTHER PROTEIN YABBY 6-RELATED 1 166 IPR006780 GO:0007275
Mepo2g01567 181 Gene3D High mobility group box domain 113 167 IPR036910 -
Mepo2g01567 181 Pfam YABBY protein 8 162 IPR006780 GO:0007275
Mepo2g01567 181 SUPERFAMILY HMG-box 108 157 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01567 Mepo-Chr2 23342198 23349907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01567 1 181 C2C2-YABBY Transcription Factor Family AT1G08465 58.201 6.29e-69 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo2g01567 YABBY 5.6e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01567 K25796 - gmx:100500026 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03465 6 46849398 46855866 Mepo2g01567 2 23342198 23349907 PCT