Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01558 ATGTTTAACGGTATGATGGATCCTGATTTGATCCGAATCGCTCAAGAACAGATGAGTCGTATGTCACCTGCTGATATGGCCAGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCTTCAGAAAGCATGAAGAATATGAATCCTCAAGATTTTAAAATGGCGGCTGAACAGTTAAAGCATACACGGCCTGAAGAGATGGCTGAGATTGGTCAGAAGATGGCTAATGCATCACCCGAAGAAGTAGCAGCTATGCGTGCTCATGCTGATGCTCAGGTCAAATATCAATTGAGTGGAGCTGAGATGTTGAAAAACCAGGGAAATGTACTACACAGTCAAGGGAAGTTCGATGATGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAACATTAAAGAGATTCCATCCTTTCAAAGTAGAAAGCTTCTTTTGGCGCTGTCACTAAACTTAATGTCCTGTTACTTGAAGACAAGGCAGTATGAAGAATGCATAAAAGAAGGTTCTGAGGTTTTAGTATATGATGCAAAGAACCTCAAGGCTCTTTATCGAAGAGGTCAAGCGTATAAGGAACTAGGCCAGCTACATGAAGCCGTTTCTGATTTGAGCAATGCAGTTGAAGTGTCTTCTGGCGATGATACAATTGCAGATCTTTTACGGGATACCAAGGAACAGTTGATAAAGGAAGGTGGTGATCGTGCACCCAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGACGAGAATGTGCCTTCTGGAAACAACAGAAGCTCTTCTTCAGAACAAAAAGTTGATCAACCAAAAAAGCTTGGTGACTCTTCTAAGAGTAAAAGTATAGCAAACAATGGGAATCCAAAATCAACTTCAGAGAGTTTAGATGCACTGAAAAAAGACCCAGAAGCCATCAGATCATTCCAAAACTTCATTTCAAATGTCGATCCTGCCACTCTGGCTTCTTTAAATAATGGACAATCCAAAGATGTGTCTCCAGATATGATTAAAGCGTCCTCGGAAATGATTGGCAAGATGTCACCTGAGGAACTTCAGAAAATGCTTGACATGGCATCTTCATTTCAAGGGGACAACCCATTTTTTGGAGGAGGTTCCTCTAATTCTCCTTTCAACCCAGGATCTATTCCTCCCAACGTGACACCCGATATGTTTAAAACTGCAAGTGATATGATGAGTAAAATGCCACCAGATGAGCTTAAGAAGATGTTTGAAATGGCATCCTTACTGAAAGGGAAAGAATCTATTCCATCACCAGCAGCTGTGGACAAGAATGAAAGAAATGTTTCACAGTCAAACTTCCCATCCTCAAGCACCACTCGTGCTTTTGGAGAACCAAGTTCTTCTAACAATGCGTTTTCAAATATTAGAAATGCTTCAGAGCCAAACTTCCCATCCTCAAGTATTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGGTTAAAAATATGAGCCCAGAAGTGATGGCAAACATGGGAGAGCAATTTGGTTTCAAGCTTTCACCAGAAGAAGCAGCAAAAGCTCAGCAGGCGATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGCTTCAAAGAGGAGCTGAATGTGCTAAAAGAACAAAGAATTGGTTGCTAGGAAGATCAGGCCTTGTCTTTGCAATATGCATGCTCATTTTGGCTTTCATTCTTCACCGGTCAGGTTTCATTGGTAGCTAG 1761 0.4123 MFNGMMDPDLIRIAQEQMSRMSPADMARIQQQMMSNPELMRMASESMKNMNPQDFKMAAEQLKHTRPEEMAEIGQKMANASPEEVAAMRAHADAQVKYQLSGAEMLKNQGNVLHSQGKFDDALQKYKLAKENIKEIPSFQSRKLLLALSLNLMSCYLKTRQYEECIKEGSEVLVYDAKNLKALYRRGQAYKELGQLHEAVSDLSNAVEVSSGDDTIADLLRDTKEQLIKEGGDRAPRKLVIEEITEEDENVPSGNNRSSSSEQKVDQPKKLGDSSKSKSIANNGNPKSTSESLDALKKDPEAIRSFQNFISNVDPATLASLNNGQSKDVSPDMIKASSEMIGKMSPEELQKMLDMASSFQGDNPFFGGGSSNSPFNPGSIPPNVTPDMFKTASDMMSKMPPDELKKMFEMASLLKGKESIPSPAAVDKNERNVSQSNFPSSSTTRAFGEPSSSNNAFSNIRNASEPNFPSSSIDLQEQMRNQMKDPAMRQMFTSMVKNMSPEVMANMGEQFGFKLSPEEAAKAQQAMSSLSPENLDKMMLWADRLQRGAECAKRTKNWLLGRSGLVFAICMLILAFILHRSGFIGS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01558 586 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 368 - -
Mepo2g01558 586 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Mepo2g01558 586 SMART tpr_5 146 179 IPR019734 GO:0005515
Mepo2g01558 586 SMART tpr_5 180 213 IPR019734 GO:0005515
Mepo2g01558 586 SMART tpr_5 103 136 IPR019734 GO:0005515
Mepo2g01558 586 MobiDBLite consensus disorder prediction 428 471 - -
Mepo2g01558 586 SUPERFAMILY TPR-like 97 220 IPR011990 GO:0005515
Mepo2g01558 586 MobiDBLite consensus disorder prediction 419 471 - -
Mepo2g01558 586 Gene3D Tetratricopeptide repeat domain 89 234 IPR011990 GO:0005515
Mepo2g01558 586 MobiDBLite consensus disorder prediction 243 294 - -
Mepo2g01558 586 MobiDBLite consensus disorder prediction 274 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01558 Mepo-Chr2 23240939 23247306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01558 93 227 Calmodulin-binding Proteins AT5G48570 30.496 2.42e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01558 - - gmx:100800315 891.338