Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01557 ATGACGAATGTTAGTGATGCTGAACAATTCGTGATAAAGTCTAAAGTACGTGCAGGGCACAAGAGAGAGTTTGCCTTTGCACTTAACTCTCACTCTGAGATCGGGACCTCATTGAGTAAAACCCGACCTTGTAAGAACCAAAATATGGTTCCTACTCCTAAACCTAAGAAGACACGAATGTCCAGTTCACAGGAAGAACTAAACGACAATGTTGTTGAAGAAACCTTCACAAAAAATGGTGATGATGGTAAGAAGAAATTGAAGAATAAGAAGGAGAACAAAAAGAATAATAAGGCACCAACTCGAGGGAAAAAGCCAGAGTTTTGTGTGAATTGCAGAGATGTCAATGTTGTGCCAGGACTAGTCTATAGTTCATGTGAGGAATCAAAGAATAGTCAACCTAGTCCAAGACATACAACTCAGACCAGTAATAGTCGTGTCTCACCAACAACCGCTAATTACATATCTCGCAAATCGGTTGTGCCTCAAACTTCATCATACAAAGGAATAAAGTGCAACACATATTGTGATAAGAGTCAGCAGAGACTAACTAGGAAGGATCAAGGCTTGCATAAGTTGGTGTTTCAAGAAAGTGTGTTGAAAGATGGAGCTGCAGTAGGATATTTTGTTCAAGGAGAGGACAAAAATGTAGAGCATAAAGCAAATGTTGTGGCAACTGGAAGGATTGCAGAGGGTGGTCCTTCAGAACAAATAGCCGAGATAAGCACCCTTTCAGTAAAACAGAAAGAGGTTGAGGATAGTTCATGTGCATTGTGCAGCATACAAGATTTCAACAATAATGAGTTTGGTCCATGGACAGTAATGATTTGTGACCAGTGTGAGAAGGGATATCATGTTGAGTGTTTGAAGGATCATAACATGGCTAACCTAGAGAAAGTACCTGAAGGTAATTGGTTCTGCAACGTAGATTGTGATGATATTCACATGAAACTAAAAAATTTAATGGCTCGTGGGGATTCACTTCTTTCAGATTACCTCCTAAATTTGATTAAAAAGAAGCAAGAAAAAAAGGGTTTTGAAACTAAATTAGGTCTTGATATAAAATGGAAGATTTTCAACAGGAAGTTGATTGATTCTGGAATTATTACTAGTTCATTGCTTTTCAATGTTGCTGCTATTTTTCATGAACAATTTGATTCCATAGTTGATACTGGAACAGATATTGATTTAATTCAAGAAATGCTTCGTGGGACGGAGATCGATGATAAATATTATTTTGGTGGAATGTATTGTGCAGTGCTCATTGTCAAGGTTTCTTCCGTTCCCTATTTTCCTGCATAG 1302 0.3794 MTNVSDAEQFVIKSKVRAGHKREFAFALNSHSEIGTSLSKTRPCKNQNMVPTPKPKKTRMSSSQEELNDNVVEETFTKNGDDGKKKLKNKKENKKNNKAPTRGKKPEFCVNCRDVNVVPGLVYSSCEESKNSQPSPRHTTQTSNSRVSPTTANYISRKSVVPQTSSYKGIKCNTYCDKSQQRLTRKDQGLHKLVFQESVLKDGAAVGYFVQGEDKNVEHKANVVATGRIAEGGPSEQIAEISTLSVKQKEVEDSSCALCSIQDFNNNEFGPWTVMICDQCEKGYHVECLKDHNMANLEKVPEGNWFCNVDCDDIHMKLKNLMARGDSLLSDYLLNLIKKKQEKKGFETKLGLDIKWKIFNRKLIDSGIITSSLLFNVAAIFHEQFDSIVDTGTDIDLIQEMLRGTEIDDKYYFGGMYCAVLIVKVSSVPYFPA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01557 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 316 IPR013083 -
Mepo2g01557 433 PANTHER AUTOIMMUNE REGULATOR 37 213 - -
Mepo2g01557 433 MobiDBLite consensus disorder prediction 71 102 - -
Mepo2g01557 433 SUPERFAMILY FYVE/PHD zinc finger 247 309 IPR011011 -
Mepo2g01557 433 SMART PHD_3 255 311 IPR001965 -
Mepo2g01557 433 MobiDBLite consensus disorder prediction 126 152 - -
Mepo2g01557 433 MobiDBLite consensus disorder prediction 31 70 - -
Mepo2g01557 433 MobiDBLite consensus disorder prediction 31 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01557 Mepo-Chr2 23222078 23225653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01557 218 428 PHD Transcription Factor Family AT2G36720 40.000 1.31e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01557 - - mtr:25492166 404.831