Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01546 ATGGAGTTTCAAAAACCTGGCAAAATTCAAGCCATAAGCTTGCCAATGATTCTTGAACCTCCGTATAAGGATTTAATCGCACAAGCATCTAATGGTTCTGGCAAAACCGCTTGTTTTGTGCTTGGGATGCTTAGTCGTGTTGATCCAAATTTGCATGCTCCTCAAGCTCTATGCATTTGTCCCACTAGATATTTAGCTATTCAGATCTTCGAAGTTCTTCAAAAGATGGGAAAGTACACAAGCATTAGTTCAGAACTTGCAATTCCTTGCATGGGCAAGACCTCAACTCCACCATCGAAACGACCACCTATTATGTCTCAGGTGGTAATTAGCATGCCTGGCACAATTAAGAACTTCATGATTTATAAAAAACTTGAGATGACGAAATTGAAGATTCTTGTATTTGATGAAGCTGATCAAATGTTTGCCAAGGATGGATTCAGAGATGATTCTCTGAGGATAATAGAAAAAACACAAAAGTTCAGTTCAAACTGTCAGGTTCTCTTTTTTTCTACTACATTAAACGACATTGTCAAGAATTTCATTACAAGGATTGTGGCGAAAGAGCATAATGAAATTTTTGTGAAGAAAGAGGAGCTATTTTTAGATGCAGTGAAGCAGTACAAAGTGCATTGTCCCAATGAACTTGCTAAGATTAAAGTGATTAAAGATTATATATTCAAAATAGGAGAGAATGTGGGGAAAACAATTATCTTTGTGCGCACTACAAATAGTACGAAAATGTTGCGTAAAGCTCTTGTTGATTTAGGCTATAAGGTTAATTTGGTTATCAACTATGATCTACCACTGAATTACACTGCTGAGTTCACCCGTGGCCGTGAACCTGAGCTTGATTGTGAGGTGTATTTTCATCGGGTTGGTAGGGCCGGGCGATTTGGGCGCAAGGGTGCTGTATTTAACCTGATATGCGACGAAAGGGATGAGAAGCTAATGTCAAAGATTGAAAACCATTTTGGCAGCCATGTCACAGAGGTAACCATGGAATCAACCAAAAACGCTCAAGCAATGGCTACTAAAGAGGAGACGGAAGAACAAAACTGGGAGCACTTGATCTCCTTATTCATGAAGGAACTCCTAAAGACTAATGTTGATCTATCTGAGGAAGTCTTCATCTCACTTTCTAGAGAATGCCATCACACGTACGAGGTATCGACTGAAGTCATATTTGATGGTGAAGGTTGTTTTACTCTCCCTGTGCGCATAAGGGGAAACTACATCGGAGAGGGTTTATGTAATTCAGGAGAAAATGCAAACCTAATGAGTTTGAAAAAGGAAAAGGAGTTAGGAAATTTGAAGATGTCTCCATATCCCAATATGATTGGTTATGCTAATGGCCATGTTGAACCGGGTGGTCTTCTTTTAGATGGCGAACAAGGGGAAACTACCATCAGAACTCCAAAGGAATTCGACGTGTTCATTGTGACTTACCCAGAATATGATGCAAGTCAAACACCAGAATGGATCTTTATCAAAGGAGTGGTGGATGATTATGCCCGAAAAGGAGTCGAAGAAGAGGAAGCTAGAGGATACCTGCTAGATGAAGACTCTGACTTTGGGGTGCCCGATACTTTCAAGGTGGGAAGCAAAAGATGCTTGGCTTCGACACTTTGA 1632 0.402 MEFQKPGKIQAISLPMILEPPYKDLIAQASNGSGKTACFVLGMLSRVDPNLHAPQALCICPTRYLAIQIFEVLQKMGKYTSISSELAIPCMGKTSTPPSKRPPIMSQVVISMPGTIKNFMIYKKLEMTKLKILVFDEADQMFAKDGFRDDSLRIIEKTQKFSSNCQVLFFSTTLNDIVKNFITRIVAKEHNEIFVKKEELFLDAVKQYKVHCPNELAKIKVIKDYIFKIGENVGKTIIFVRTTNSTKMLRKALVDLGYKVNLVINYDLPLNYTAEFTRGREPELDCEVYFHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGSHVTEVTMESTKNAQAMATKEETEEQNWEHLISLFMKELLKTNVDLSEEVFISLSRECHHTYEVSTEVIFDGEGCFTLPVRIRGNYIGEGLCNSGENANLMSLKKEKELGNLKMSPYPNMIGYANGHVEPGGLLLDGEQGETTIRTPKEFDVFIVTYPEYDASQTPEWIFIKGVVDDYARKGVEEEEARGYLLDEDSDFGVPDTFKVGSKRCLASTL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01546 543 SMART ultradead3 2 208 IPR014001 -
Mepo2g01546 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 325 IPR027417 -
Mepo2g01546 543 Gene3D - 1 198 IPR027417 -
Mepo2g01546 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 186 IPR027417 -
Mepo2g01546 543 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 157 340 IPR001650 -
Mepo2g01546 543 Pfam DEAD/DEAH box helicase 8 180 IPR011545 GO:0003676|GO:0005524
Mepo2g01546 543 Gene3D - 259 345 IPR027417 -
Mepo2g01546 543 Gene3D - 199 258 IPR027417 -
Mepo2g01546 543 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 16 192 IPR014001 -
Mepo2g01546 543 PANTHER RNA HELICASE 259 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01546 Mepo-Chr2 23090935 23095904 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01546 3 332 Eukaryotic Initiation Factors Gene Family AT1G72730 29.737 2.89e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01546 K18655 - gmx:100778091 434.491