Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01541 ATGAAATGGAACAGAGGCCACGCTATAGGCCATGGCTCAACATCCACCGTCAACCTAGCCACCGTTAACGGCGAAATCTTTGCCGTGAAGTCATCCGAGCTATCGAGATCAGAACCGCTAAAGAGAGAGGAGAAAATTCTATCTTCTCTATGTTATCCTAATCCTTATGTGGTTACTTATAAAGGGTGTGACATTACCATGGAGAATAACAAGTTCATGTACAATCTCTTCATGGAGTACATGCCATTTGGCACACTTAGCCAGCACGGTGGCATGCTCGACGAGCAAGCCATCGTGTGCTATACAAGGCAAGTTGTGAAGGGGTTAGAGCATTTGCATTCAAAAGGGTTGGTGCATTGTGACATCAAGGGTGCCAATATCATGATTGGTGAAGATGGAGCCAAAATTGGAGACTTTGGATGTGCTAAAAGTGTAAATGAAGCCGCGGCACCAATCCGCGGAACCCCGGTGTTTATGGCGCCAGAAGTGGCACGTGGAAAAGAACAAGATTTTTCTAGTGATATTTGGTCACTTGGTTGCACTATAATTGAAATGGCAACTGGTTCTTCACCATGGCCTAATGTAGATGACCCTATTTCAACACTTTATCATATAGCATATTCCAATGATGTTCCTCAGATTCCATGTTTTCTATCAAATCAAGCAAAGGACTTTTTGGGGAAATGTTTAAGGAGGAATCCAAAAGAGAGATTTTCAGCTACTCAACTTTTGAAGCATCCATTTCTTGGGGAGTCATTATGTTCTAATGACAAGCAAGTTTTGGAATCTAATTCAATATCACCAACCAGTATTCTTGATCAAGGCTTTTGGAGTTCTATGGAAGAATCAGAAGGCCTTAGCTTTTGTAGTTTGATTCACACAAGTTTTGAGAATTCTATTGTTGATGATAGGATCAGAAGGTTAGCAGGGGAACCCTGTTTGGCAAGGTGGCATGATGATGATAATTGGATCACAATTAGAGGGAATGAAGTTGATGGTTTTTGCAATTGTGGGTCAGAGATAGGTTCAACTAGTGATGAGTTGGTGTATAATAAGATCAAGGAAATGCTTAACACTCTTGAATGTCCTAAGAAATATACGTTTAACTTGGCTGATCTTGTTAAGCCTGATCCTCATCGTACCGAGTTCTTTCTCGGCACTCTTCTCAATTTCTGTCTCGACAGAGCTGGGAGAATGAATTCCATATCAAAATATGTAGACGAATTCAACGCCTTGGAACAGAAGATAGTGGAGATTGAGGAGAATAATAAGATTACGCAGTTAAAATTAGCGATTGCTGAATCCTTTGAAGCGAGAGAAAGGGAGACGCCATTTGTTCAGAAGGTGGATGTAAAAGTTAAAGAGCTGCGTCAAACTATTCCAAACCTGAACAACAAACAGATGTCGTTGAAGACTGATTTAAAGAAGTTGAAAGAGAAGAATGTGGAAATGGATGAACAGGTTTCTGATGCTGAATATAAACTGATCCAAAATGTTCAAGAGAATGCAAATTTACGTTCGAAAATTGCTCAATCACCTGATAAAGTACAGAGGGCTTTAGAGGAAAAGAAATTAGCTCGAGACGTGGCAAGAAATTTTGAAAGATTAGCCATGCACAATTTCCATGAGAAGACTGCCCTCGTCGAAGTTTTTTCCAAGGTAGATGCCGTAAATAGTAGAATTACCTCAGAAAAAGAATCTGCAACAGCTAAAGTGGATCAGTTAGATAGTAAAGGGACAGAGTTAGTCGAAGAGATTGAACCTTGTTCTCAAGACTGTCATGTAGAATTTCATTTGAGGGATTGTTTTTGCATTGCTTATTGTGATAGTGAATGA 1836 0.4009 MKWNRGHAIGHGSTSTVNLATVNGEIFAVKSSELSRSEPLKREEKILSSLCYPNPYVVTYKGCDITMENNKFMYNLFMEYMPFGTLSQHGGMLDEQAIVCYTRQVVKGLEHLHSKGLVHCDIKGANIMIGEDGAKIGDFGCAKSVNEAAAPIRGTPVFMAPEVARGKEQDFSSDIWSLGCTIIEMATGSSPWPNVDDPISTLYHIAYSNDVPQIPCFLSNQAKDFLGKCLRRNPKERFSATQLLKHPFLGESLCSNDKQVLESNSISPTSILDQGFWSSMEESEGLSFCSLIHTSFENSIVDDRIRRLAGEPCLARWHDDDNWITIRGNEVDGFCNCGSEIGSTSDELVYNKIKEMLNTLECPKKYTFNLADLVKPDPHRTEFFLGTLLNFCLDRAGRMNSISKYVDEFNALEQKIVEIEENNKITQLKLAIAESFEARERETPFVQKVDVKVKELRQTIPNLNNKQMSLKTDLKKLKEKNVEMDEQVSDAEYKLIQNVQENANLRSKIAQSPDKVQRALEEKKLARDVARNFERLAMHNFHEKTALVEVFSKVDAVNSRITSEKESATAKVDQLDSKGTELVEEIEPCSQDCHVEFHLRDCFCIAYCDSE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01541 611 FunFam Mitogen-activated protein kinase kinase kinase 17 2 304 - -
Mepo2g01541 611 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Mepo2g01541 611 Gene3D Ncd80 complex, Nuf2 subunit 339 430 IPR038275 -
Mepo2g01541 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Mepo2g01541 611 CDD STKc_MAPKKK 2 249 - -
Mepo2g01541 611 SUPERFAMILY Protein kinase-like (PK-like) 3 279 IPR011009 -
Mepo2g01541 611 ProSiteProfiles Protein kinase domain profile. 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01541 611 SMART serkin_6 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01541 611 Pfam Protein kinase domain 5 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01541 611 Coils Coil 446 494 - -
Mepo2g01541 611 Coils Coil 402 429 - -
Mepo2g01541 611 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 329 - -
Mepo2g01541 611 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
Mepo2g01541 611 Pfam Nuf2 family 349 409 IPR005549 GO:0000776|GO:0031262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01541 Mepo-Chr2 23006427 23013772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01541 1 329 MAP Kinase Kinase Kinase AT1G05100 49.858 6.51e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo2g01541 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01541 K20716 - gmx:100794648 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01541 2 23006427 23013772 Mepo6g00936 6 9797325 9799162 ECH
Mepo2g01541 2 23006427 23013772 Mepo2g01541 2 23006427 23013772 ECH
Mepo6g03484 6 47014623 47015958 Mepo2g01541 2 23006427 23013772 PCT