Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01518 ATGAAAAGCATGGTGACGACGGCGGTGAAGGAAATTTGTTACCGTGTCGTGAGGAAGCGACCATGGGGTCAATTTGTTGCTGAAATTCGAGATCCATGGAAGAAAACTCGTGTCTGGTTAGTGGCTTATGATATCGCTGAACAAGCAACACATGCTTATGATGCTGCCGCAATTAAATTTGAGATCTACGGAGTCGATTCCATAAAATTTTATCCAAACTTTGTACAAACAGATCTAAAATCTTGA 246 0.4106 MKSMVTTAVKEICYRVVRKRPWGQFVAEIRDPWKKTRVWLVAYDIAEQATHAYDAAAIKFEIYGVDSIKFYPNFVQTDLKS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01518 81 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Mepo2g01518 81 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Mepo2g01518 81 Pfam AP2 domain 14 61 IPR001471 GO:0003700|GO:0006355
Mepo2g01518 81 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Mepo2g01518 81 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 61 - -
Mepo2g01518 81 SUPERFAMILY DNA-binding domain 14 60 IPR016177 GO:0003677
Mepo2g01518 81 Gene3D AP2/ERF domain 13 75 IPR036955 GO:0003700|GO:0006355
Mepo2g01518 81 SMART rav1_2 13 81 IPR001471 GO:0003700|GO:0006355
Mepo2g01518 81 CDD AP2 14 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01518 Mepo-Chr2 22630137 22630382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01518 6 80 AP2-EREBP Transcription Factor Family AT1G28360 52.000 6.39e-22 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo2g01518 AP2 1.3e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01518 K09286 - cpap:110808864 85.1149