Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01467 ATGGCTGACTCAGAACACTCCTCTAAAAATGTTTCAGCAGATTCCACAGATCAGCAATCAAACCAAGGTTCAAAGGTTGAATTTTCTGAAGAAGAAGAAATGCTTATTAAAATGGTTTATAATCTCGTTGGGGACAGGTGGTCATTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGAAGAAATAGAAAAATATTGGAATTCAAGACACTCGACTAGCGAATGA 225 0.3778 MADSEHSSKNVSADSTDQQSNQGSKVEFSEEEEMLIKMVYNLVGDRWSLIAGRIPGRTAEEIEKYWNSRHSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01467 74 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Mepo2g01467 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 74 IPR017930 -
Mepo2g01467 74 Gene3D - 27 69 - -
Mepo2g01467 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 70 - -
Mepo2g01467 74 ProSiteProfiles Myb-like domain profile. 30 70 IPR001005 -
Mepo2g01467 74 SMART sant 24 72 IPR001005 -
Mepo2g01467 74 MobiDBLite consensus disorder prediction 1 28 - -
Mepo2g01467 74 MobiDBLite consensus disorder prediction 1 25 - -
Mepo2g01467 74 CDD SANT 30 67 IPR001005 -
Mepo2g01467 74 FunFam MYB-like transcription factor 27 69 - -
Mepo2g01467 74 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01467 Mepo-Chr2 21792589 21793796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01467 28 68 MYB Transcription Factor Family AT1G22640 58.537 2.68e-13 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo2g01467 Myb_DNA-binding 6.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01467 - - jre:108985255 108.997