Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01414 ATGTTGGTGAAAAGCCAAAATAAAGTGGAAGGACACAAGTCCCTCGCGGATACATTGGCGAGATGGAAAGAATATAATGCACGGCTTGAATCGAGCGGTGAAGCTCCGAAGCCAGTTAGGAAAGTTCCTGCCAAGGGGTCGAAAAAAGGGTGTATGAAGGGTAAAGGAGGTCCCGAAAACTCGCGATGTAATTACAGAGGTGTTAGGCAAAGGATTTGGGGAAAATGGGTTGCTGAAATTCGCGAGCCAAATAGAGGGAATAGGCTCTGGTTAGGTACATTTTCAAATGCCGTCGGTGCTGCTCTTGCTTACGATGAAGCAGCGAGGGCAATGTATGGTTCTTGTGCACGCCTGAATTTTCCTAATGTGGAAGTGTCCAATTTCTCTCAGGTGGAATCTTTGAAAGATTCTCCAGCTGCAGATCAATCTGGTTTAGTAAAGACAACATCAGAAATTACCAAGTCTGTGGTATCGCTGGATAACGCTCGGGTAGATGCAGCTGAAGACATTGACATGAAAGATCTTTCCTTGTTGTTAAGTGTGACTGTGAATCATGTGGAAAGGGAAGGTGAATCACTATCTGTCACTAGTTGA 594 0.4495 MLVKSQNKVEGHKSLADTLARWKEYNARLESSGEAPKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRIWGKWVAEIREPNRGNRLWLGTFSNAVGAALAYDEAARAMYGSCARLNFPNVEVSNFSQVESLKDSPAADQSGLVKTTSEITKSVVSLDNARVDAAEDIDMKDLSLLLSVTVNHVEREGESLSVTS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01414 197 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Mepo2g01414 197 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 MobiDBLite consensus disorder prediction 30 59 - -
Mepo2g01414 197 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 PRINTS Ethylene responsive element binding protein signature 103 123 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 CDD AP2 63 123 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Mepo2g01414 197 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700|GO:0006355
Mepo2g01414 197 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 143 - -
Mepo2g01414 197 SUPERFAMILY DNA-binding domain 64 121 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01414 Mepo-Chr2 20761197 20763067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01414 8 123 AP2-EREBP Transcription Factor Family AT2G40340 62.500 4.61e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g01414 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01414 - K09286 gmx:100499747 260.766