Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01396 ATGTCCAGTAACATGGGAACTGTTTTTCTCTTTTTCAATCTTTATACTTCTTGGTTGCTAATATGCTCTTCTAAGCTGTGTTTAGCAGGAGATACTTTGAACATTGGCGAGAAGATATTAGGCAATGAAACCTTCACCAACCTTGTTTCAGCTGGAAAAATATTTGAACTTGGCTTCTTTACTCCAAGCAACAATGATGCCTCACAAAGATACTTAGGTATATGGTATCACATGCAAGAAGAGGGGTCACATCAACCTCAAAAACAAACAGTGGTGTGGGTTGCCAACAGAGACAGCCCTGTAGCTGTTGGTTCCATTGGAGTTTTCCAAATAGCATTGGATGGGAGTCTTGAAGTTGTAGACACATCAGCTAAGGAATACTGGTCATCTCCCAAAAAACACTTTCTTAGTTTTTCACCTAAAATCAGATTCAGGACAGTGAAACTCATGGATTCTGGTAATCTTGTGTTATATGATGATGAACATTTGGGAGTGAAACTGTGGGAGAGCTTTGAAAATCCAACTGACACATTCTTGCCCGGAATGAAGATGGATCGGAATTTGAAACTGACCGGTTGGAAAACTGCTGATGACCCAGGAAGTGGGGATTTCAGTTTTATTTTGGAACAAACAGGAGAAAATCGTTTCGTCATCTTAAACAGAAACCAAATTTATTGGGAGAGCGAAATGTTGAATTCCTGGAGATCAAAGTTTGATCAATTGGATGACATTAGCTTAGATGTTTATTACTTGTTGACCAACTTGAGCTCGCTTAGCCTGAACTATACAAGGTTGCTCCTTGATTCAGAAGGTTTGTTACAGTGGATGGACAATTTGTTGGAAGTTAAATGGATGCAGCCAAGAACCCAATGCTTAATATATAATTTTTGTGGAAACTTTACTAGGTGTAACGATAACGACGAGGAGGTATGCAAATGTTTACCTGGATTCAGCGAAGACATGGAAACTTGTAAGAGGACAAAATCAGTATCATGTGCTAGAAATGAGACGGCTTTCTTGAACTTGACCATGATAAAAACAGGAAGGCCAGATAAAAAGTTAGCAGCTCAAAATGAAACACATTGCAAATCTATTTGCCTTGAGATGTGTTCACAGTGCCAGGCTTACTCATATGCTCCAGTTCCTACTGTTCAGCATCAGCGTGATCCTATTCTTTCGACATGTTGGATCTGGACACAGAATTTAACTACTCTTAAAGAAGAGTATACTAATTGGGATGACCGTAGACTCATTGTCCTTGTTGATAAATCAGACTTAGCACCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACGTAGTCCCTTATCCTCTCAGTACAGGATCCAACTGTGGAGACAACAAATACTTCAACTTTACTTGCAACTCGGGCCAAGGCCAGCTTAGCTTCTCCACCAACAACAACGATAGTTACAGAGTTATTCGTGTAGAGCCAAATTTAAGAAATTTTATCATTTCTAATGAGGTTAATTCTTTAAGTAATGATTGTCATGGAGGACATACTAACAAGGGAAATTTAAAGATTTCTTCACCGTTTCAAATGATCAGTCACAATCCGTGCTATAAACATGTAGAAGTTCTTTGGGAAGCACCTTCAGAACCCATTTGTAATAACTCTGTTGACTGCCTAGGCTGGAAACACTCTACCTGTAATAAAGATTACAGGTGTGTTTGCAATACAAACTATAACTGGAGTGGCGAATCTTTAAGGTGTACAGAAAATAAGGATAGCGTACGAAGAAATATTAGAGGGCGATTTTACGACAGTGAAAGACATGTGAAGGATTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGAAGGAATAGAGGTTCCGTATTTCGATTTCGAGAGCATACTAATGGCAACAGATGACTTTTCCGATGCAAATAAACTTGGAAAAGGTGGTTTTGGGCCAGTTTACAAGGGTAAGCTTGGTGGTCAAGAAATTGCAGTGAAGAGACTTTCAAATGTTTCAACACAAGGCTTACAGGAATTTAAGAATGAGGTTGTTTTGATTGCTAAACTTCAACATCGTAACCTTGTTAAATTACGCGGCTACTGCGTAAAAGGACAGGAAAAAATTCTGCTTTATGAGTATATGCCTAACAAAAGCTTGGACTTAATGATATTCGATTCGACAAAAAGCGTAATTTTGGATTGGCCAATGCGGTTTGAAATAATTCTCGGGATTGCTCGTGGACTTCTCTATCTTCATCAAGACTCAAGACTTAGAGTTATTCACCGTGATTTGAAAACTAGCAACATTCTTCTAGACGAGGAGATGCAACCGAAAATCTCAGATTTTGGACTAGCAAGAATAGTTGGAGGCACGGAAACTGAGGCAAGCACAGAGAGGGTTGTTGGCACATACGGGTACATGTCTCCTGAGTATGCCTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGCTTGAGATCATCAGCGGAAAAAGAAACACCGGATTCTATCGATCTAAAGAGATTTCAAGCCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGAGAAATTGCAAGATTTAATGGATCCATCTCTATTCGATACTTGCAACGTCAACCAATTTATTAGGTGTTCACAAATTGGACTCCTATGCGTACAAGACGAACCAGATGAGCGTCCACACATATCAAATGTGGTGACCATGCTAGACAATGAAACTACAACCCTCTTAACCCCTAAACAACCAACCTTTTTTACACGTAAAGACCTCTCTAGCACAGCTTCTTCAAGTTTGCAGCTTGATAGTATCATTGAAGAAGGACGATGA 2832 0.3951 MSSNMGTVFLFFNLYTSWLLICSSKLCLAGDTLNIGEKILGNETFTNLVSAGKIFELGFFTPSNNDASQRYLGIWYHMQEEGSHQPQKQTVVWVANRDSPVAVGSIGVFQIALDGSLEVVDTSAKEYWSSPKKHFLSFSPKIRFRTVKLMDSGNLVLYDDEHLGVKLWESFENPTDTFLPGMKMDRNLKLTGWKTADDPGSGDFSFILEQTGENRFVILNRNQIYWESEMLNSWRSKFDQLDDISLDVYYLLTNLSSLSLNYTRLLLDSEGLLQWMDNLLEVKWMQPRTQCLIYNFCGNFTRCNDNDEEVCKCLPGFSEDMETCKRTKSVSCARNETAFLNLTMIKTGRPDKKLAAQNETHCKSICLEMCSQCQAYSYAPVPTVQHQRDPILSTCWIWTQNLTTLKEEYTNWDDRRLIVLVDKSDLAPTPRTCEPCGTNVVPYPLSTGSNCGDNKYFNFTCNSGQGQLSFSTNNNDSYRVIRVEPNLRNFIISNEVNSLSNDCHGGHTNKGNLKISSPFQMISHNPCYKHVEVLWEAPSEPICNNSVDCLGWKHSTCNKDYRCVCNTNYNWSGESLRCTENKDSVRRNIRGRFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESILMATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSNVSTQGLQEFKNEVVLIAKLQHRNLVKLRGYCVKGQEKILLYEYMPNKSLDLMIFDSTKSVILDWPMRFEIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIVGGTETEASTERVVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFYRSKEISSLLGYAWRLWREEKLQDLMDPSLFDTCNVNQFIRCSQIGLLCVQDEPDERPHISNVVTMLDNETTTLLTPKQPTFFTRKDLSSTASSSLQLDSIIEEGR 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01396 943 Pfam S-locus glycoprotein domain 258 319 IPR000858 GO:0048544
Mepo2g01396 943 SUPERFAMILY Protein kinase-like (PK-like) 616 924 IPR011009 -
Mepo2g01396 943 SMART serkin_6 634 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01396 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Mepo2g01396 943 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 137 926 - -
Mepo2g01396 943 Gene3D Phosphorylase Kinase; domain 1 600 708 - -
Mepo2g01396 943 ProSiteProfiles Bulb-type lectin domain profile. 30 170 IPR001480 -
Mepo2g01396 943 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 232 IPR036426 -
Mepo2g01396 943 ProSiteProfiles Protein kinase domain profile. 634 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01396 943 Gene3D - 25 172 IPR036426 -
Mepo2g01396 943 Pfam D-mannose binding lectin 90 189 IPR001480 -
Mepo2g01396 943 SMART blect_4 36 174 IPR001480 -
Mepo2g01396 943 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 599 708 - -
Mepo2g01396 943 Pfam Protein tyrosine and serine/threonine kinase 638 903 IPR001245 GO:0004672|GO:0006468
Mepo2g01396 943 ProSiteProfiles PAN/Apple domain profile. 332 417 IPR003609 -
Mepo2g01396 943 CDD B_lectin 39 174 IPR001480 -
Mepo2g01396 943 ProSitePatterns EGF-like domain signature 2. 311 324 IPR000742 -
Mepo2g01396 943 CDD STKc_IRAK 640 906 - -
Mepo2g01396 943 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 709 912 - -
Mepo2g01396 943 PIRSF SRK 1 440 IPR024171 GO:0004674
Mepo2g01396 943 PIRSF SRK 577 940 IPR024171 GO:0004674
Mepo2g01396 943 Gene3D Transferase(Phosphotransferase) domain 1 709 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01396 Mepo-Chr2 20459034 20462768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01396 622 922 Receptor kinase-like Gene Family AT4G23140 57.468 3.12e-119 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo2g01396 PK_Tyr_Ser-Thr 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01396 - - tpra:123882048 1264.6