Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01380 ATGGCTAGAACTCCTTCCTGTGACAAAATTAGTGGAATGAGGAAAGGGACATGGACACCTGAAGAAGATAGAAAATTAATTGCGTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTACCAAAGTTTGCAGGTCTTTCAAGGTGTGGAAAGAGTTGTAGATTGAGGTGGCTGAACTATTTAAGACCTAATATCAAAAGAGGTAACTTCACTCAACAAGAAGAGGAGTTGATTATCAAAATGCATAAAAAGCTTGGCAATAGATGGTCAACCATTGCAGCTGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAATCATTGGCACACTTCCCTCAAGAAGAGAGCTATAGATAACATAGTCACAAATGAAGAAACCAAATCCACCAAATCAAAAGAAATTATTGAATCCACACAAAGGAAAGATATATCCATTTACCAAATTAATTGTGGTTCCCAAATCTCAGACACCAATGGTCCATTATCCCCATTTTCATCATCTAGTGAAATCTCTTCCACTTCTTCAGATCAAAGTTCCACTGCTTTGGATGATTTTGGGTTTCTGGATTCATTTTTAAAAGATGTGGATGAAAGCTTTTGGCTTCATGATCTTTCCAATACACCAAGTGGAATAGTGCAAAACAATACTAATGATGCTACCACTAATGATGCTTTTTTAGTGTCTCCTGGTCATTCGTCCAATGAAAGTTTTGTCATGGATAATGATTTTGGAAGCTTTTTAGATGCTTACAAGGAGTCAACAGTTGATAGTTTTTGGACACAACCATATGAGGCTGACATGTCCCACGTTCCAAGACAATTGCTGACACCTTTGCCGATGGAATCTGAATATTTTTCTATAGTATATGATGATGATATTTGGAGTTGA 891 0.3737 MARTPSCDKISGMRKGTWTPEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIKMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSTKSKEIIESTQRKDISIYQINCGSQISDTNGPLSPFSSSSEISSTSSDQSSTALDDFGFLDSFLKDVDESFWLHDLSNTPSGIVQNNTNDATTNDAFLVSPGHSSNESFVMDNDFGSFLDAYKESTVDSFWTQPYEADMSHVPRQLLTPLPMESEYFSIVYDDDIWS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01380 296 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo2g01380 296 MobiDBLite consensus disorder prediction 155 177 - -
Mepo2g01380 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo2g01380 296 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mepo2g01380 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 214 - -
Mepo2g01380 296 FunFam MYB-related transcription factor 14 67 - -
Mepo2g01380 296 SMART sant 14 64 IPR001005 -
Mepo2g01380 296 SMART sant 67 115 IPR001005 -
Mepo2g01380 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Mepo2g01380 296 Gene3D - 70 116 - -
Mepo2g01380 296 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mepo2g01380 296 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mepo2g01380 296 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Mepo2g01380 296 CDD SANT 70 113 IPR001005 -
Mepo2g01380 296 Gene3D - 15 67 - -
Mepo2g01380 296 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01380 Mepo-Chr2 20131110 20132285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01380 1 201 MYB Transcription Factor Family AT2G31180 52.239 1.15e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g01380 Myb_DNA-binding 9.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01380 K09422 - gmx:100777107 346.665