Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01379 ATGGCAAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGGACTTGGACTGCTGAAGAAGATAGGAAATTGATTGCTTATGTCACTCGATATGGTTGCTGGAATTGGCGACAACTCCCTAAGTTTGCAGGTCTTTCAAGGTGTGGAAAGAGTTGTAGATTGAGGTGGCTGAACTATTTGAGGCCTAATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGCAATAGATGGTCAACCATTGCGGCTGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCACACTTCTCTCAAGAAGAGAGCTATAGATAACAAAGTCACCAATGAAGAAACCAAATCCACACAAAGGAGAGATATATCCAATCACCAAATTACCCCTCCAGCTAACTCCCAAATCTCAGACACCAATGGCCCTTTATCCCCATTTTCATCATCTAGTGAATTCTCTTGTACATCTTCAGATCACAGCTCCACTGCTTTGGATGATTTTGGGTTTCTGGATTCATTTATAGAAGATGTGGATGAAAGTTTTTGGCTTCATGATCTTTCCAACACACCAAGTGGAATAGTGCAAAACCATACTACTGAAAGTTTTGTTATGGCTAATGATTTTGGAAGCTTTTTAGATGCGTACAAGGAGTCAACAGTTGATAGTTTTTGGACACAACCATATGAAGTTGACATGTCCCACGTTCCAACTGAACTACTGATACCTTTGTCGATGGAATCTGAAAATTTTTCTATAGTATATGACAAGGATATTTGGAGTTGA 816 0.3958 MARTPSCDKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNKVTNEETKSTQRRDISNHQITPPANSQISDTNGPLSPFSSSSEFSCTSSDHSSTALDDFGFLDSFIEDVDESFWLHDLSNTPSGIVQNHTTESFVMANDFGSFLDAYKESTVDSFWTQPYEVDMSHVPTELLIPLSMESENFSIVYDKDIWS 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01379 271 MobiDBLite consensus disorder prediction 118 132 - -
Mepo2g01379 271 CDD SANT 69 112 IPR001005 -
Mepo2g01379 271 FunFam MYB-related transcription factor 13 66 - -
Mepo2g01379 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo2g01379 271 CDD SANT 16 61 IPR001005 -
Mepo2g01379 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g01379 271 Gene3D - 68 139 - -
Mepo2g01379 271 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g01379 271 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mepo2g01379 271 Gene3D - 14 66 - -
Mepo2g01379 271 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g01379 271 MobiDBLite consensus disorder prediction 118 162 - -
Mepo2g01379 271 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo2g01379 271 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo2g01379 271 SMART sant 66 114 IPR001005 -
Mepo2g01379 271 SMART sant 13 63 IPR001005 -
Mepo2g01379 271 MobiDBLite consensus disorder prediction 133 162 - -
Mepo2g01379 271 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 198 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo2g01379 Mepo-Chr2 20120192 20121317 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01379 1 193 MYB Transcription Factor Family AT2G31180 52.332 4.18e-60 189
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g01379 Myb_DNA-binding 3.5e-13 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01379 K09422 - gmx:778087 335.109