Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01378 ATGGATAAGGGTTTGGATTCTCTCGCTGACATTGTTCCCGGTAGGGAGACCTGGAGGATCAAGGTGCGTGTTCTCAGGATGTGGGAGGTTCAATCATTTTTCAAGCCTGACGAGACTAACTCCCTGGAGATGGTGTTGATCGATCAAAAGGGTGCCAAGATTCACGCCACCGTTAGGAAACAGCTGTTGTATGTGTTCCAGAAGAAGCTTGCTGAGGGTGGGGTTTATAAGATGTCCTACTTTTCTGTTGCCCCAGGATACGGTTCGTATCGTACCACAGTTCATCCTTATAAGCTGATCTTCCAGATGAAGACAAAGGTCGAAAGGGCTGAGAGTTCGATGATCCCACAGTATGGTCTGTCAATTACCAAGATTAGTGATGTTTGTGCTCACTCTGCCGATCATGATTATTTAGTTGATGTTATTGGTTTTATGACTGGAATATCTGCGGAGCGAGAGTATGTTAGGGATGGCAAGGTGACCAAGATGATTGTTTTTGAGCTAACTGATGAGAGCAGTGGTAAGGTTGAGTGTGCTTTGTTTGGTAGTTATGTTGAATCCCTTCGGAAGATGATGGGAAAGTCTGTTGAGGGGTTGCCTGTGGTTGTGGTTCAATTTGCTAAGATTAAGATTTTCAGAGATAGGGTGTCAATCCAGAATGTTATGAATACCACCAAGATTTGGCTTAATCCTCCTATGGAAGAGGCTATTAGATTTAGGGAGGGTGTTGCTGTTCATGGTGTGGAGTCATCTGCTCCTGTGCCTGTGCTTGGTCCGCGCATTAGGCCTTCTTTTAGGGAGGATTTCTTGCAGCTGTATCCAAGGAAAACAATATCTGGTCTTAATGAGCTTGACGATGATGGGACCTTTGTTGTTTTTGCTACCATTGAAGGTTTGGTCGAAGGAGAGGATTGGTGGTATCCAGCCTGTAGGTGTCACAGGAGTGTTACAGCTGATTCTGGTGCATACTACTGCAAAGGATGTGTGAAGCATGTTTTCCATATGGTGCCAAGGTACAAGGCTAAGGTTATTGTGGGGGATGGAACTGGTGATGTTGTGCTTGTTATGTTTGATGGTAACATGCAGTCCCTCCTTGGTGTGCAGTGTAGTACATTGGTGTCTGCAGCCAAGGCTGAGAATGGTGGTTTCTATCCAACTGAAATGTCAAAGCTAAAGGGCAATAGTATGTTGTTTAGGGTTAAGAGGAATGCATCTGCGAGTGTGATGTATGATGGATCATTTAGGGTTAAAAGGGTTTGCGTTGATTCCGAAATTATTTTTGAGTTTGCAGAGACTGTGGAGGATTGCCCACCTGAGAAGGATGGATTGGCTGATGTTGAGGTTGTTCGGGAGACACAGGCTGACGTTGTTGCAGCAAACGTTTTTCCCCAGACTCGGTCTCCTATGTTAAGTCATGTAGAGCTTAAGAATGTTGTTGCTGGTGCTCATGGTGATTTGGGTGAAGATGTTGAGGTTGTTCAGGAGACACAGGCTGATGTTATTGCAGCCAACGTTGTTGGCCAGACTCGGTCTCCTATACTAAGTCATGTGGAGCTTAAGAATTCTGTTGCTGAGGTTGAGGTTGCACCTCCTGGTCTTGGGGGTGGCCCCATTCATTTGGGTGATGATTTTGGCTGTGTTGATCACGATGGTGTGCCTGGTGTTGAGGGTACACGGAAGAAACGTTTACTCAAAAGTGTTAAGAGGAATTTGGCTGAGGATTTTGATGGTGCTACTGATGAACAATATGGTGTTGTCACTCCCATTGCCAAACGTGTTGTCAAGGGTGTCAAGAAAAGCTATAAGGAGTGA 1812 0.4531 MDKGLDSLADIVPGRETWRIKVRVLRMWEVQSFFKPDETNSLEMVLIDQKGAKIHATVRKQLLYVFQKKLAEGGVYKMSYFSVAPGYGSYRTTVHPYKLIFQMKTKVERAESSMIPQYGLSITKISDVCAHSADHDYLVDVIGFMTGISAEREYVRDGKVTKMIVFELTDESSGKVECALFGSYVESLRKMMGKSVEGLPVVVVQFAKIKIFRDRVSIQNVMNTTKIWLNPPMEEAIRFREGVAVHGVESSAPVPVLGPRIRPSFREDFLQLYPRKTISGLNELDDDGTFVVFATIEGLVEGEDWWYPACRCHRSVTADSGAYYCKGCVKHVFHMVPRYKAKVIVGDGTGDVVLVMFDGNMQSLLGVQCSTLVSAAKAENGGFYPTEMSKLKGNSMLFRVKRNASASVMYDGSFRVKRVCVDSEIIFEFAETVEDCPPEKDGLADVEVVRETQADVVAANVFPQTRSPMLSHVELKNVVAGAHGDLGEDVEVVQETQADVIAANVVGQTRSPILSHVELKNSVAEVEVAPPGLGGGPIHLGDDFGCVDHDGVPGVEGTRKKRLLKSVKRNLAEDFDGATDEQYGVVTPIAKRVVKGVKKSYKE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01378 603 CDD RPA1_DBD_B_like 140 235 - -
Mepo2g01378 603 Gene3D - 114 250 IPR012340 -
Mepo2g01378 603 PANTHER OS03G0429900 PROTEIN 8 409 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo2g01378 603 Gene3D - 6 112 IPR012340 -
Mepo2g01378 603 Gene3D - 271 425 IPR012340 -
Mepo2g01378 603 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Mepo2g01378 603 CDD RPA1_DBD_A_like 19 107 - -
Mepo2g01378 603 CDD RPA1_DBD_C 279 401 IPR047192 -
Mepo2g01378 603 Pfam Replication factor-A C terminal domain 292 405 IPR013955 -
Mepo2g01378 603 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
Mepo2g01378 603 SUPERFAMILY Nucleic acid-binding proteins 120 246 IPR012340 -
Mepo2g01378 603 SUPERFAMILY Nucleic acid-binding proteins 273 421 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01378 Mepo-Chr2 20116509 20119512 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01378 1 400 Core DNA Replication Machinery Family AT5G08020 23.445 3.12e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01378 - - mtr:11425976 573.548