Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01374 ATGGTAAGAGCTCCTTTCTATGACAAAAATGGTGTTAAGAAAGGTTCATGGAGTAGAGATGAGGATACAAGGTTAAGTGATTATATTCAGAAACATGGTCATTCTAATTGGCGTCAACTCCCCAAGCTTGCAGGAAATGACACTCAACATTTTGTAACACCTGAAATCCCTATCTCTGATGTTGGTAAGGACTTCCATTATATTTTAGAAAGCTCAGCAATAACCATATCCAGAGAAACATCAGTGGAAGATAACTCTTCACCTGCCTCCATCAACTGCCCCATAATGGAAGAAGACAATGTTGCTCCTTGGTTAGTGTTTGAATCATTTACTGGAGATTTTTGGACTGATCCATGCACCCTAGAAGAAACATCCACCACTAATGAGATATCAAGTGAAGACATAGACTTATTGATTCAAGACTTCTATGATGGTTCATATATGTTTTAG 450 0.38 MVRAPFYDKNGVKKGSWSRDEDTRLSDYIQKHGHSNWRQLPKLAGNDTQHFVTPEIPISDVGKDFHYILESSAITISRETSVEDNSSPASINCPIMEEDNVAPWLVFESFTGDFWTDPCTLEETSTTNEISSEDIDLLIQDFYDGSYMF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01374 149 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 45 - -
Mepo2g01374 149 CDD SANT 16 46 IPR001005 -
Mepo2g01374 149 Pfam Myb-like DNA-binding domain 14 46 IPR001005 -
Mepo2g01374 149 ProSiteProfiles Myb-like domain profile. 9 48 IPR001005 -
Mepo2g01374 149 SUPERFAMILY Homeodomain-like 9 43 IPR009057 -
Mepo2g01374 149 Gene3D - 12 60 - -
Mepo2g01374 149 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 46 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01374 Mepo-Chr2 20061836 20063624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01374 1 45 MYB Transcription Factor Family AT5G10280 62.222 5.92e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo2g01374 Myb_DNA-binding 6.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01374 K09422 - gmx:100776043 84.7297