Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01372 ATGGTTAGAGCTCCTTATTTTGACAAAAATGGAACAAAAAAAGGTGCATGGAGTAAGGAAGAAGATCAGAGACTTATAGCTCACATTGAGAGACATGGCCATCCTAATTGGCGTCAACTTCCCAGAGTTGCAGGTTTGGCAAGATGTGGAAAGAGTTGCAGGCTACGTTGGATGAATTATCTGAGGCCAAATCTAAAACGAGGGAACTATACACAGAAGGAGGAACAAATGATCATGGAATTGCATAAAAAGCATGGAAATAAATGGTCTCTTATAGCTGAAAATCTACCTGGAAGATCAGACAACGAGATAAAGAATTACTGGCACAGCCACCTGCAGAAAATCTCAAAGCGCAATGATACTAAGTTCACACAAGAGATTGAAAGTACAAAAACGACAAGTGAAGCTGTTAGTGTTGATTCCCACCACATTTTGGAAAGTTCATTTTCAATGTCCTCTGAAATATCCTACCCTAATAATAAAGTCAACTCCCCTTCAATTTCCTCTAGTCATGTAGAATCAAACATGGACTTCTACAAAAGAGATCAAGATAGTGTTGCTTCTTGGGAAACATGGGATGGATTCAGCAATAATTTTTGGACTGAACCGTTTGTTTATGAAAATGCATTGAGTCAGGATTACTTTCCCATTTCATGCTATGGAGAAGAGGTAGAGGATCCATTTGTTTTATGGTAG 696 0.3865 MVRAPYFDKNGTKKGAWSKEEDQRLIAHIERHGHPNWRQLPRVAGLARCGKSCRLRWMNYLRPNLKRGNYTQKEEQMIMELHKKHGNKWSLIAENLPGRSDNEIKNYWHSHLQKISKRNDTKFTQEIESTKTTSEAVSVDSHHILESSFSMSSEISYPNNKVNSPSISSSHVESNMDFYKRDQDSVASWETWDGFSNNFWTEPFVYENALSQDYFPISCYGEEVEDPFVLW 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01372 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo2g01372 231 CDD SANT 69 112 IPR001005 -
Mepo2g01372 231 CDD SANT 16 61 IPR001005 -
Mepo2g01372 231 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 174 - -
Mepo2g01372 231 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g01372 231 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo2g01372 231 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g01372 231 SMART sant 66 114 IPR001005 -
Mepo2g01372 231 SMART sant 13 63 IPR001005 -
Mepo2g01372 231 FunFam MYB-related transcription factor 13 66 - -
Mepo2g01372 231 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo2g01372 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g01372 231 Gene3D - 7 67 - -
Mepo2g01372 231 Gene3D - 69 113 - -
Mepo2g01372 231 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01372 Mepo-Chr2 19976400 19978856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01372 1 176 MYB Transcription Factor Family AT4G09460 49.444 4.75e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g01372 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01372 K09422 - gmx:100781032 325.479