LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g01366	ATGGCAAAGTCTAGCTATTTGGTTCCTTTGGCCTTTTTCACATTGCTCTTATTCTTGCATGAGGCCATGGCTCGCATTCCCATTAACTCAAAATGGCACAATGCAAGTGCAACCTTCTACGGTGACATCAATGGTGGGGAAACCATGCAGGGGGCTTGTGGATATGGAGATCTTTTTAAGCAAGGCTATGGGCTTGAAACAACAGCACTGAGCACGGCACTGTTTAATAATGGTTATAGTTGTGGTGCCTGTTTTGAAATCAAGTGTGTCAACGACCCACAGTGGTGTAAAAAGGATGTAAAATCGATAACGGTAACGGCCACCAATTTTTGTCCACCAAATTACATCGATGGCAGTTGGTGTAATCCCCCACATGAACATTTTGACTTGAGCCAGAAAATGTTCACGACAATAGCCATATACAGAGCAGGGATCATCCCAGTTCAATATCGACGTGTTCCGTGCCGCAAAAGTGGTGGTGTTAAATTTCAACTAAGCGGAAACCCTTATTTTTTGATGGTTTTGATTTATAATGTTGCCGATGCTGGTGATATTTTACGTGTTTTAGTCAAAGGTTCTAATACTGATTGGGCTCCGATGACACATAATTGGGGACAAAATTGGCACACTGGATTAAAATTGGTTGGACAGGATGTGTCATTTTGGGTTACAACAAGTGATCGCAAGGCATTGAAGTTTTTATCCGTTGTTCCTTCAAATTGGCAATTTGGACAAACCTACGAAGGATCGATCAATTTTTAG	762	0.4173	MAKSSYLVPLAFFTLLLFLHEAMARIPINSKWHNASATFYGDINGGETMQGACGYGDLFKQGYGLETTALSTALFNNGYSCGACFEIKCVNDPQWCKKDVKSITVTATNFCPPNYIDGSWCNPPHEHFDLSQKMFTTIAIYRAGIIPVQYRRVPCRKSGGVKFQLSGNPYFLMVLIYNVADAGDILRVLVKGSNTDWAPMTHNWGQNWHTGLKLVGQDVSFWVTTSDRKALKFLSVVPSNWQFGQTYEGSINF	253

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g01366	253	CDD	DPBB_EXPA_N	32	155	-	-
	Mepo2g01366	253	SUPERFAMILY	Barwin-like endoglucanases	31	178	IPR036908	-
	Mepo2g01366	253	PANTHER	EXPANSIN-A15	22	249	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	159	171	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	118	135	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	206	227	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	103	113	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	135	148	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	62	76	IPR002963	GO:0009664
	Mepo2g01366	253	PRINTS	Expansin signature	89	100	IPR002963	GO:0009664

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g01366	Mepo-Chr2	19905035	19906102	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g01366	28	253	Expansin Gene Family	AT5G39280	64.035	1.16e-109	315

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g01366	-		-	gsj:114422475	350.517

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