Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01366 ATGGCAAAGTCTAGCTATTTGGTTCCTTTGGCCTTTTTCACATTGCTCTTATTCTTGCATGAGGCCATGGCTCGCATTCCCATTAACTCAAAATGGCACAATGCAAGTGCAACCTTCTACGGTGACATCAATGGTGGGGAAACCATGCAGGGGGCTTGTGGATATGGAGATCTTTTTAAGCAAGGCTATGGGCTTGAAACAACAGCACTGAGCACGGCACTGTTTAATAATGGTTATAGTTGTGGTGCCTGTTTTGAAATCAAGTGTGTCAACGACCCACAGTGGTGTAAAAAGGATGTAAAATCGATAACGGTAACGGCCACCAATTTTTGTCCACCAAATTACATCGATGGCAGTTGGTGTAATCCCCCACATGAACATTTTGACTTGAGCCAGAAAATGTTCACGACAATAGCCATATACAGAGCAGGGATCATCCCAGTTCAATATCGACGTGTTCCGTGCCGCAAAAGTGGTGGTGTTAAATTTCAACTAAGCGGAAACCCTTATTTTTTGATGGTTTTGATTTATAATGTTGCCGATGCTGGTGATATTTTACGTGTTTTAGTCAAAGGTTCTAATACTGATTGGGCTCCGATGACACATAATTGGGGACAAAATTGGCACACTGGATTAAAATTGGTTGGACAGGATGTGTCATTTTGGGTTACAACAAGTGATCGCAAGGCATTGAAGTTTTTATCCGTTGTTCCTTCAAATTGGCAATTTGGACAAACCTACGAAGGATCGATCAATTTTTAG 762 0.4173 MAKSSYLVPLAFFTLLLFLHEAMARIPINSKWHNASATFYGDINGGETMQGACGYGDLFKQGYGLETTALSTALFNNGYSCGACFEIKCVNDPQWCKKDVKSITVTATNFCPPNYIDGSWCNPPHEHFDLSQKMFTTIAIYRAGIIPVQYRRVPCRKSGGVKFQLSGNPYFLMVLIYNVADAGDILRVLVKGSNTDWAPMTHNWGQNWHTGLKLVGQDVSFWVTTSDRKALKFLSVVPSNWQFGQTYEGSINF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01366 253 CDD DPBB_EXPA_N 32 155 - -
Mepo2g01366 253 SUPERFAMILY Barwin-like endoglucanases 31 178 IPR036908 -
Mepo2g01366 253 PANTHER EXPANSIN-A15 22 249 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 159 171 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 135 148 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 171 192 IPR002963 GO:0009664
Mepo2g01366 253 PRINTS Expansin signature 235 251 IPR002963 GO:0009664
Mepo2g01366 253 Gene3D - 21 156 IPR036908 -
Mepo2g01366 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 160 IPR007112 -
Mepo2g01366 253 SUPERFAMILY PHL pollen allergen 157 249 IPR036749 -
Mepo2g01366 253 Gene3D - 160 253 IPR036749 -
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
Mepo2g01366 253 PRINTS Expansin/Lol pI family signature 143 159 IPR007118 GO:0005576
Mepo2g01366 253 Pfam Lytic transglycolase 67 150 IPR009009 -
Mepo2g01366 253 SMART dpbb_1 67 150 IPR007112 -
Mepo2g01366 253 Pfam Expansin C-terminal domain 161 238 IPR007117 -
Mepo2g01366 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 170 249 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01366 Mepo-Chr2 19905035 19906102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01366 28 253 Expansin Gene Family AT5G39280 64.035 1.16e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01366 - - gsj:114422475 350.517