Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01357 ATGGGTCGTGCAAAAATACCAATGAAATACATCCAAAAGGAGAAATCTCGCAAACTAACTTTCAAAGAAAGAAAAAATGGATTAGCAAGGAAACTTAATCAATTTGTTAGCAAGACTGGAGCAAAAGCTTGTTTGATTGTGTATGATAATGATGGTAATAATGTGGGACCAATGTCATGGCCAGAAGACCCTACAATTGTAAACTCCATGCTTCAAGAATATGAGCATAAGAAGATTGAGGAAGCTCCTGAAATATTTGATGTCCACAAATACTATGAAATTAAGAAGAATAAAATTGAAGCTAAGATAACCAATGTGAGGAAAGATACCCTCAAGAAGAAGTATCCAACTTGGCATCCACATTTCCAAAACATGGAAGAAAATCAACTCAGAGACTTCATTGCTACCGTAAATGATAGGATCCAAGCTTGTGATCACAAAATCAGCATCTTGAAAAATATGCAACATAGTGAAACTAGTTTCTTGCAAAACAATGCTCTCGTGCAAAATATGGTTCAAGAGAGTGTGGTTTCCTCACATTCAAGCCAAGTTAATGCCATACATAACATCCCTCAAATGCAACAACACATCAATGGTACTAGTGATTTGCCTCAGAATTCATCAACAAACCAACTTCATGATATTAGTAAGATGATTGATTTCACTAATCTTGGTGATTTGCCTCCTAGTACATCTACAAAGCAACTTAGTCAACTTGGTGATTTTGATGATTCGTTAAATCAACTAGATGGTGGTGTTTTGAATCAGGCTAGTCAGCCTGATCAGTTTTTCTGGAAAGATCTTTCTTTTTCATCTCAAAGTGAAAAGGGCAATGCAAGTTATCTTATTGATTTGCATCCTAGTTCGTCAACAAAGCAACTTAGTCGACCTAATGATTTTGGTTATTGGTTAAATGATGGTGATTTGAACTGGGCTAGTCAACCTAATCAGTTTGCATGGAAAGATCTTTCTTTTTCATCTCAAAGTGAAGAGGGCAATGCAAGTTATCTTGGTGATTTTCCTCCTAGTTCATCAACAAAGCAACTTAGCCAACCTTGTGCTTTTGACGATCGGTTAAAACAATTAGATGATGGTGTTGGTCAGTTTGCCTCGAAAGATCTTTCTTTTTCGTCTCAAAGTGAAGAGGGCAATCCAAATTATCTTATTGATTTGCATCCTAGTTCGTCAACAAAGCAACTTAGTCAACCTAATGATTTTGGCTATTGGTTAAATGATGGTGATTTGAACTGGGCTAGTCAACCTGATCAATTTGCATGGAAAGATCTTTCTTTTTCATCTCAAAGTGAAGAGGGCAATGCAAGTTATCTTGGTGATTTTCCTCCTAGTTCATCAACAAAGCAACTTAGCCAACCTCGTGCTTTTGACGATCGGTTAAAACAATTAGATGATGGTGTTGGTCAGTTTGCCTCGAAAGATCTTTCTTTTTCGTCTCAAAGTGAAGAGGGCAATCCAAGTTATCTTATTGATTTGCATCCTAGTTCGTCAACAAAGCAACTTAGTCAACCTAATGATTTTGGCTATTTGTTAAATGATGGTGATTTGAACTGGGCTAGTCAACCTAATCAGTTTGCATGGAAAGATCTTTCTTTTTCATCTCAAAGTGAAGAGGGCAATGCAAGTTATCTTGGTGATTTTCCTCCTAGTTCATCAACAAAGCAACTTAGCCAACCTCGTGCTTTTGACGATCGGTTAAAACAACTAGATGATGGTGTTGGTCAGTTTGCCTCAAAAGATCTTTCTTTTCCATCTCAAAGTGAAGAGGGCAATGCAAATTCGGATGATTTGATCCAATGGAAAGATAAATTTTAA 1830 0.3678 MGRAKIPMKYIQKEKSRKLTFKERKNGLARKLNQFVSKTGAKACLIVYDNDGNNVGPMSWPEDPTIVNSMLQEYEHKKIEEAPEIFDVHKYYEIKKNKIEAKITNVRKDTLKKKYPTWHPHFQNMEENQLRDFIATVNDRIQACDHKISILKNMQHSETSFLQNNALVQNMVQESVVSSHSSQVNAIHNIPQMQQHINGTSDLPQNSSTNQLHDISKMIDFTNLGDLPPSTSTKQLSQLGDFDDSLNQLDGGVLNQASQPDQFFWKDLSFSSQSEKGNASYLIDLHPSSSTKQLSRPNDFGYWLNDGDLNWASQPNQFAWKDLSFSSQSEEGNASYLGDFPPSSSTKQLSQPCAFDDRLKQLDDGVGQFASKDLSFSSQSEEGNPNYLIDLHPSSSTKQLSQPNDFGYWLNDGDLNWASQPDQFAWKDLSFSSQSEEGNASYLGDFPPSSSTKQLSQPRAFDDRLKQLDDGVGQFASKDLSFSSQSEEGNPSYLIDLHPSSSTKQLSQPNDFGYLLNDGDLNWASQPNQFAWKDLSFSSQSEEGNASYLGDFPPSSSTKQLSQPRAFDDRLKQLDDGVGQFASKDLSFPSQSEEGNANSDDLIQWKDKF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01357 609 MobiDBLite consensus disorder prediction 331 350 - -
Mepo2g01357 609 MobiDBLite consensus disorder prediction 543 566 - -
Mepo2g01357 609 CDD MADS_SRF_like 2 81 IPR033897 GO:0000981|GO:0000987|GO:0045944
Mepo2g01357 609 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Mepo2g01357 609 MobiDBLite consensus disorder prediction 543 564 - -
Mepo2g01357 609 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 53 IPR002100 GO:0003677|GO:0046983
Mepo2g01357 609 Gene3D - 13 76 IPR036879 GO:0003677|GO:0046983
Mepo2g01357 609 MobiDBLite consensus disorder prediction 437 458 - -
Mepo2g01357 609 MobiDBLite consensus disorder prediction 584 599 - -
Mepo2g01357 609 MobiDBLite consensus disorder prediction 480 505 - -
Mepo2g01357 609 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo2g01357 609 MobiDBLite consensus disorder prediction 374 398 - -
Mepo2g01357 609 SUPERFAMILY SRF-like 2 78 IPR036879 GO:0003677|GO:0046983
Mepo2g01357 609 MobiDBLite consensus disorder prediction 582 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01357 Mepo-Chr2 19687634 19689463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01357 1 142 Type I MADS-box Gene Family AT5G55690 30.137 3.14e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo2g01357 SRF-TF 8.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01357 - - cam:101509886 279.641