Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01349 ATGAGTTGGTCTTCCTTTTATCACACAGCCTCTAGGGTTTTCCATGAGTATCCATCCTGGTCTAAGTCTGTTGTTGTATGCACTATCATCAGCGGTGGAGGTTTAGCTGCATATGGTGATAGCAGATCAGCATATAGTGATAATGGTGATCAAAGAGCAAGAAAGAAAGTGGTAGTGCTTGGAACTGGTTGGGCTGGAACTAGTTTTGTAAAAAGCATGAAAAACTCATCTTATGATATTCATGTTGTTTCACCACGTAATTATTTTGCATTCACTCCTTTGTTACCAAGTGTTACTTGCGGCACGGTGGAGGCACGAAGCATCATTGAACCAATTCGAAAAATCAGCAGAAAGAGTGGTTTAGATGTTCAATTCAGTGAAGCTGAATGCTATAAGATTGATCCAAAGAATAACAAAGTTTACTGTAGATCTAATCAAGACAAAAAGCTTGGTGGTGTAGAAGAATTTTCCATTGATTATGATTACTTAGTAATAGCTATGGGAGCTCGTTCTAACACTTTTAACACACCTGGTGTTGAGGAGCATGCCTACTTCTTGAAGGAAGTGGAAGATGCTATGAGAATCCGCACAAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTCCCTTCTGTACCAGTGGAAGAGAAGAAAAAACTTCTTAGTTTTGTAATTGTTGGTGGCGGTCCAACTGGAGTTGAGTTTGCTGCAGAGTTACATGATTTTGTGCATGAAGATCTCTCTAAATTATATCCTTCTCTTATAGACCATGTCAAGATTACTCTCCTTGAGGCCGGCGATCATATCTTAAACATGTTTGACAAGAGAATAACAGAATTTGCTGAAGAAAAGTTCAAAAGAGATGGAATTGATGTGAAATTGGGATCAATGGTTGTCAAAGTTGGTGAAAAAGATATCTCATCCAAAGAAAGAGGTAGTGGTCAGGTTGTTACTATGCCTCATGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGTCCTGAAATACTCGATTTTATGAAACAACTTGGCCAGATTAATCGGCGTGCATTGGTGACCGATGAATGGCTAAGGGTGGAAGGGTGTAACAACATCTATGCTCTAGGTGATTGTGCGACTATAAATCAGCGTAGAATTATGGAAGATATAGCTGTGATATTTAACAAGGCAGACAAGGACAATTCCGGAATGTTAGATCTTAAAGAATTTCAAAACGTTGTTGGTGACATTATTGAGAGGTATCCACAAGTGGACATTTATTTAAAGAAGAATCAAATGAAAGACATGGCCACCTTGCTAAGTAAATCTCAGGAAAGCCCTACTACAGAAGTGGACATTGAATACTTCAAACAAGCTCTTTCCAAAGTTGATTCTCAGATGAAAAATCTACCGGCAACTGCTCAGGTAGCTGCCCAACAAGGAGCTTATCTTGCAGACTGTTTCAACCGCATGGAATTGTGTGAGAAATATCCAGAAGGCCCTCTAAGGTTTAGGGGAACAGGACGCCATCAGTTTCATGCCTTCAGGTACTCGCATTTTGGCCAGTTTGCTCCTCTCGGGGCAGAACAAACAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATTGGACACAGCAGTCAGTGGCTGTGGTATTCGGTATATGTAAGATTACAAGCTCCACTTGATTTTGAGCTTGTTGTTTTGCTGGCGAAAGTCGAACTTATCAAATGA 1707 0.4048 MSWSSFYHTASRVFHEYPSWSKSVVVCTIISGGGLAAYGDSRSAYSDNGDQRARKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIIEPIRKISRKSGLDVQFSEAECYKIDPKNNKVYCRSNQDKKLGGVEEFSIDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAMRIRTKVINLFERASLPSVPVEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLIDHVKITLLEAGDHILNMFDKRITEFAEEKFKRDGIDVKLGSMVVKVGEKDISSKERGSGQVVTMPHGMVVWSTGIGARPEILDFMKQLGQINRRALVTDEWLRVEGCNNIYALGDCATINQRRIMEDIAVIFNKADKDNSGMLDLKEFQNVVGDIIERYPQVDIYLKKNQMKDMATLLSKSQESPTTEVDIEYFKQALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCEKYPEGPLRFRGTGRHQFHAFRYSHFGQFAPLGAEQTAAQLPGDWVSIGHSSQWLWYSVYVRLQAPLDFELVVLLAKVELIK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01349 568 SUPERFAMILY EF-hand 371 462 IPR011992 -
Mepo2g01349 568 SUPERFAMILY FAD/NAD(P)-binding domain 214 374 IPR036188 -
Mepo2g01349 568 Gene3D - 441 564 - -
Mepo2g01349 568 Gene3D - 46 429 - -
Mepo2g01349 568 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Mepo2g01349 568 SMART efh_1 381 409 IPR002048 GO:0005509
Mepo2g01349 568 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 379 IPR023753 GO:0016491
Mepo2g01349 568 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Mepo2g01349 568 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 406 - -
Mepo2g01349 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Mepo2g01349 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Mepo2g01349 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Mepo2g01349 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Mepo2g01349 568 SUPERFAMILY FAD/NAD(P)-binding domain 55 273 IPR036188 -
Mepo2g01349 568 PANTHER NADH DEHYDROGENASE 49 557 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01349 Mepo-Chr2 19605916 19610545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01349 5 560 Chloroplast and Mitochondria Gene Families AT4G21490 66.370 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01349 K03885 - gmx:100820044 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01349 2 19605916 19610545 Mepo2g01349 2 19605916 19610545 ECH