Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01348 ATGACGATTGGTTCCTTCTTCAACAAAGCCTCCAGGGCCCTCAGCACTCACCCTTTCTCTTCCAACTTTCTGCTTCTTTGTACTATCAGTGGTGGAGGTGTGGTAGCACTCTCAGAATCACAATCAGAAGCTGAACGTCGTAGTATTGAAGATCATCACCCCCAAAAAAAGAAAATCGTGGTCCTTGGAACTGGATGGGGTGCTACCAGTTTCCTTAAGGGTTTGGATGGTTCATTATATGATGTTCAAGTTGTTTCGCCTCGTAACTACTTTGCATTTACTCCGTTATTACCGAGTGTCACTTGTGGATCAGTTGAAGCACGGAGCATCGTAGAGCCAGTCCGAAACATCATTAAAAAGAGAAATGGAGAAATAAAATTTTGGGAGGCTGAATGTGTCAAGATCGATGCTGCAGACAAAAAGGTTGTTTGTCGGTCTAATATTGAAAACTTAGTGGGAAGTGGTGAATTTTCTCTGGACTATGACGTCTTGGTTGTAGCAGTAGGAGCACAAGTAAATACTTTTAATACCCCTGGTGTTAAGGAGAACTGTCATTTTCTGAAGAATGTCGAGGATGCTCAGCAGATCAGACTGTCTGTAATAGATTGTCTTGAGAAGGCTGTTCTTCCTAGTCAATCTGAAGAGGAGCAAAGGTCAAATCTTCATTTTGTAATCGTTGGAGGAGGTCCAACTGGTGTTGAATTTGCAGCTGAACTGCATGATTTTATCCAAGAAGATTTGAAGAAATTATATCCAACCGTTAAAGATAAAGTCAAGATAACACTAATTCAATCTGGAGATCATATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGAAGAAATTTACTAGAGATGGTATAGAAGTTCAAACGGGATGCCGCGTTATGAGTGTTGATGACAAGGAAATTACAATGAAGGTGAAATCAACGGGAGCGGTTTGCTCTGTGCCCCATGGATTGGTTATCTGGTCCACTGGCATTTCTACTCTTCCAGTTATAAGGGATTTTATGGAAGAAATTGGTCAGGCTAAAAGGCATGTACTGGCAACTGATGAATGGTTGAGAGTAAAGGGATGTGAAAATGTGTTTGCCATTGGTGATTGTTCATCAATAAATCAACGTAAAATCATGGATGATATCTTGGACATATTTAAGGCTGCAGACAAAAATAACTCCGGTACCTTAACTGTAGAAGAATTCGAAGAAGTGATGGATGATGTAATCTTAAGATATCCTCAAGTTGAATACTATCTAAATAAGAAACATATACTTGATTTGAGGGTTCTGTGGAACGACCCACAAGGAAATGAAAGAAAAGAAATAGACATAGAAGGGTTTAAGCAGGCCCTTTCTGTTGCAGATTCCCAGGTGAAGACTCTTCCAGCAACTGCACAGGTTGCTGCGCAACAAGGTGCATACCTAGCAAGTTGCTTTAATCGTGTTGATGATACTGAAGATAATCCAGAAGGACCTCGACGATTTTCTGGATCTGGACATCATCGGTTTCGTCCCTTTCGGTATAAGCATTTTGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATTGGCCACAGCACACAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTATTTGGTCATGTCTGATTGGGCTAGAAAATTCGTATTTGGGAGGGATTCGAGTCGGGTTTAA 1734 0.4152 MTIGSFFNKASRALSTHPFSSNFLLLCTISGGGVVALSESQSEAERRSIEDHHPQKKKIVVLGTGWGATSFLKGLDGSLYDVQVVSPRNYFAFTPLLPSVTCGSVEARSIVEPVRNIIKKRNGEIKFWEAECVKIDAADKKVVCRSNIENLVGSGEFSLDYDVLVVAVGAQVNTFNTPGVKENCHFLKNVEDAQQIRLSVIDCLEKAVLPSQSEEEQRSNLHFVIVGGGPTGVEFAAELHDFIQEDLKKLYPTVKDKVKITLIQSGDHILNMFDERISSFAEKKFTRDGIEVQTGCRVMSVDDKEITMKVKSTGAVCSVPHGLVIWSTGISTLPVIRDFMEEIGQAKRHVLATDEWLRVKGCENVFAIGDCSSINQRKIMDDILDIFKAADKNNSGTLTVEEFEEVMDDVILRYPQVEYYLNKKHILDLRVLWNDPQGNERKEIDIEGFKQALSVADSQVKTLPATAQVAAQQGAYLASCFNRVDDTEDNPEGPRRFSGSGHHRFRPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVMSDWARKFVFGRDSSRV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01348 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Mepo2g01348 577 SUPERFAMILY FAD/NAD(P)-binding domain 56 274 IPR036188 -
Mepo2g01348 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 47 407 - -
Mepo2g01348 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 377 IPR023753 GO:0016491
Mepo2g01348 577 Gene3D - 435 577 - -
Mepo2g01348 577 Gene3D - 46 405 - -
Mepo2g01348 577 SUPERFAMILY FAD/NAD(P)-binding domain 221 375 IPR036188 -
Mepo2g01348 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Mepo2g01348 577 SMART efh_1 382 410 IPR002048 GO:0005509
Mepo2g01348 577 SUPERFAMILY EF-hand 336 460 IPR011992 -
Mepo2g01348 577 PANTHER NADH DEHYDROGENASE 50 577 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01348 Mepo-Chr2 19599179 19604788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01348 5 577 Chloroplast and Mitochondria Gene Families AT4G21490 62.284 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01348 K03885 - gmx:100793566 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01348 2 19599179 19604788 Mepo2g01348 2 19599179 19604788 ECH