Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01258 ATGGGTGTTCTTCAGTCCACCCTTCTCTACTTCATTTTATTACATTCAATCAACATTGTTGCTTACAAGGATCAAGAATGGAAGAAAGCCACTGCAACTTATGCCAAAGACACAGAAGGATCTCTAATTACAGAAGGAGCTTGTGGTTATGGAGATCTTCACAAAGCTAGCTATGGAAAACATAGTGTTGGATTAAGCACAATTTTGTTCAGCAGAGGGAGTACATGTGGGGCTTGCTATGAGATCAGATGTGTTGACCATATCTTGTGGTGTATGCTTGGAAGTCCTTCTGTTATTGTTACTGCCACTGATTTCTGTCCTCCTAATTTTGGTCTCTCAGTTGATTATGGTGGTTGGTGTAACTTTCCAAGAGAACATTTTGAGTTGTCACTGGCTGCATTTGCTGAAATTGCTAAGGGGAAAGCTGATATTATTCCCGTTCAATATAGAAGAGTGAAGTGTGAAAGAAGTGGAGGATTGAAATTCACAATGAGTGGAAGTTCTCATTTCTATCAAGTCCTGATAACTAATGTGGGGTTAGATGGTGAAGTTTTTGCTGTGAAAGTGAAGGGATCTAGAACAGGATGGATACCAATGGCAAGGAATTGGGGAATGAATTGGCATTGCAATGTCAACCTTCAACATCAGCCTTTGTCCTTTGAGACAGGAACAAGGTTTAAATCATACCAAGATACAAGAAATCTAAGGACATTGAATTCAGAAACTAACTCTGAAGATCAGAAAGTTAGTTTAGAACGTTCTGATGGTAGTTCAGAAGCTATGTTCAGAAGCTTCAGAAGGGCGTTCAGAAGCGAACCCAGAATCATCTTCAGAAGCTGTGTTCAGAAGCTTCAAAAGGACGTTCAGAAGCGAACCCACAATCATCTTCAGAAGCTGTGTTCAGAAGCTTCAGAAGGGCGTTCAGAAGCAAACTCAGAATCATCTTCAGAAGCTGTGTTCAGAAGCTTCAGAAGGGCGTTCAGAAGCGAACTCAGAATCATCAAGAACGTGAAGAACATGCAAGGCACATGTGACATGGATATATGTCCAGGAAAGTACACTTGCATGAATCAATCAAGCAATAAAGGCATATACAAGGATTATGTCAAAAAGGATACTCAATGTTCATTTAAGACTATGAACATTGATGTACTAGGAAAATTCCACAAAGGAATATTATCCTAG 1185 0.3983 MGVLQSTLLYFILLHSINIVAYKDQEWKKATATYAKDTEGSLITEGACGYGDLHKASYGKHSVGLSTILFSRGSTCGACYEIRCVDHILWCMLGSPSVIVTATDFCPPNFGLSVDYGGWCNFPREHFELSLAAFAEIAKGKADIIPVQYRRVKCERSGGLKFTMSGSSHFYQVLITNVGLDGEVFAVKVKGSRTGWIPMARNWGMNWHCNVNLQHQPLSFETGTRFKSYQDTRNLRTLNSETNSEDQKVSLERSDGSSEAMFRSFRRAFRSEPRIIFRSCVQKLQKDVQKRTHNHLQKLCSEASEGRSEANSESSSEAVFRSFRRAFRSELRIIKNVKNMQGTCDMDICPGKYTCMNQSSNKGIYKDYVKKDTQCSFKTMNIDVLGKFHKGILS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01258 394 Gene3D - 13 155 IPR036908 -
Mepo2g01258 394 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 221 IPR007117 -
Mepo2g01258 394 Gene3D - 159 241 IPR036749 -
Mepo2g01258 394 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Mepo2g01258 394 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mepo2g01258 394 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Mepo2g01258 394 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Mepo2g01258 394 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Mepo2g01258 394 PANTHER EXPANSIN-A15 18 237 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Mepo2g01258 394 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Mepo2g01258 394 CDD DPBB_EXPA_N 26 154 - -
Mepo2g01258 394 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 159 IPR007112 -
Mepo2g01258 394 SUPERFAMILY PHL pollen allergen 156 222 IPR036749 -
Mepo2g01258 394 Pfam Lytic transglycolase 64 149 IPR009009 -
Mepo2g01258 394 Pfam Expansin C-terminal domain 161 222 IPR007117 -
Mepo2g01258 394 SUPERFAMILY Barwin-like endoglucanases 26 177 IPR036908 -
Mepo2g01258 394 SMART dpbb_1 62 149 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01258 Mepo-Chr2 17563740 17567253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01258 9 222 Expansin Gene Family AT4G38210 64.815 3.02e-101 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01258 - - gmx:100804002 424.091