Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01226 ATGGAGATGGAACAGCTGGTGAGCATGGGTTTTTCTGAGGAGTTAGCCACCCAAGCGTTGGCCGCCACCGGCGGCAAATCCATCGTCGAAGCCACAGAATGGATTCTCACTCAAAACCCTAACAAAGGTAACTCTACTGATAACCGTTCATCATCTTTTTCTTTCCAACCTAAACTCAATCATTTCTTCCAACAAAAACAAACCAAACGCATTAAAGAATCACAAACACAAACACAAACACAACAAAACAAACCCTACACTCATCAACAGTTACATGAACGTCTGTGTCCAAGAAATTTGGACGAAGTTGTCGGACAAGACCATCTGCTTGCAAACAATTCCATTCTTTGTTCAACGATCCAACGCAGACGTCTCCCTTCCATTATCCTGTGGGGTCCACCCGGCACTGGTAAGACAACTATTGCCAAAGCTATTGTTAACTCAACAAATTCAAATTTCTATAGCTTTGTGTCTTTATCTGCCGTTACTAGCGGCGTTAAAGACGTTAGAGATGTTGTTGAAGACGCCAGAAAACTCAGACACAGAACAAAACAAACCACTATTCTCTTTGTTGATGAAGTTCATAGGTTTAATAAATCTCAACAGGATTCTTTCTTACCCGTCATTGAAGATGGAAGCATTGTCTTCGTTGGCGCCACTACTGAAAACCCTTCTTTTCATTTGATCACACCTCTTTTGTCTCGTTGTCGTGTCCTTACCCTTAACCCTCTTCAACCACATCACCTCGTTTTGCTTCTCAACCGTGCTGTCGCTGATACAGACAAAGGCTTGGTTCAAAGCCTTGGTTTTGGTTCTGGTTTTTCCAAAGTTGATATTAGTGTTGGTAACAATGTGGTTGATTTCATTGCTAACAATTGTGATGGAGATGCTCGTGTTGCTTTGAATGTATTGGAGATTGCTTCCGTTAATGCTGCTGCTCGGGTTCAACAGGATAATAAGGAATTCAAGGATGTTGTTAGTGTCAGTGTTAGTGTGGAGGATGCTAAGGAGGCACTTCAATGCAAGCATCTTGCTTGTGATAAAACTGGAGAAGAACACTATAATTTAATTAGTGCACTACACAAGTCTATGAGGGAAAGTGATGCCGATGCAGCGATATATTGGTTGGCAAGAATGCTACAAGGAGGTGAAGAGCCGCTTTATATTGCACGTAGGCTTGTACGATTTGCAAGTGAGGATGTTGGTTTGGCTGATCCTTTAGCTCTTAATCAAGCTGTTTCCTGTTACCAATCTTGTCACTTTATAGGAATGCCCGAGTGCAATGTCATTCTTGCACAATGTGTTGCTTACTTGGCTTTGGCACCTAAATCCATAGCAGTTTATAGAGCAATTGGAGCTTCCGAGAAGGTAGTGAGCGAGTCAATTGGACAGAATGAAGGGGCGCCTCTTCATCTCAGGAATGCACCGACCAAGTTAATGAAGGAAATTGGGTATGGGAAGGGATACATATACCCTCCTGACAACCCTTCTTCAACACATAACTACTTGCCACCCTCCCTTCAAGGGTTCAAATTCCTCAATTGGCCTGACAAGAATCCCTCTGAATCTGATGGATAA 1578 0.4265 MEMEQLVSMGFSEELATQALAATGGKSIVEATEWILTQNPNKGNSTDNRSSSFSFQPKLNHFFQQKQTKRIKESQTQTQTQQNKPYTHQQLHERLCPRNLDEVVGQDHLLANNSILCSTIQRRRLPSIILWGPPGTGKTTIAKAIVNSTNSNFYSFVSLSAVTSGVKDVRDVVEDARKLRHRTKQTTILFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLQPHHLVLLLNRAVADTDKGLVQSLGFGSGFSKVDISVGNNVVDFIANNCDGDARVALNVLEIASVNAAARVQQDNKEFKDVVSVSVSVEDAKEALQCKHLACDKTGEEHYNLISALHKSMRESDADAAIYWLARMLQGGEEPLYIARRLVRFASEDVGLADPLALNQAVSCYQSCHFIGMPECNVILAQCVAYLALAPKSIAVYRAIGASEKVVSESIGQNEGAPLHLRNAPTKLMKEIGYGKGYIYPPDNPSSTHNYLPPSLQGFKFLNWPDKNPSESDG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01226 525 Gene3D - 244 326 - -
Mepo2g01226 525 MobiDBLite consensus disorder prediction 66 88 - -
Mepo2g01226 525 FunFam Putative AAA family ATPase 340 443 - -
Mepo2g01226 525 SUPERFAMILY post-AAA+ oligomerization domain-like 350 517 IPR008921 GO:0003677|GO:0006260
Mepo2g01226 525 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Mepo2g01226 525 SMART AAA_5 124 244 IPR003593 GO:0016887
Mepo2g01226 525 SUPERFAMILY UBA-like 3 40 IPR009060 GO:0005515
Mepo2g01226 525 Gene3D - 444 523 - -
Mepo2g01226 525 CDD AAA 104 237 - -
Mepo2g01226 525 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 1 521 - -
Mepo2g01226 525 FunFam AAA-type ATPase family protein 244 326 - -
Mepo2g01226 525 Pfam ATPase family associated with various cellular activities (AAA) 128 238 IPR003959 GO:0005524|GO:0016887
Mepo2g01226 525 Pfam AAA C-terminal domain 278 365 IPR032423 -
Mepo2g01226 525 Pfam MgsA AAA+ ATPase C terminal 367 515 IPR021886 -
Mepo2g01226 525 CDD HLD_clamp_RarA 244 314 - -
Mepo2g01226 525 Gene3D - 2 39 - -
Mepo2g01226 525 SMART uba_6 1 37 IPR015940 -
Mepo2g01226 525 Gene3D - 76 242 IPR027417 -
Mepo2g01226 525 Gene3D - 340 443 - -
Mepo2g01226 525 Pfam UBA/TS-N domain 4 35 IPR015940 -
Mepo2g01226 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 323 IPR027417 -
Mepo2g01226 525 FunFam Replication-associated recombination protein A 78 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01226 Mepo-Chr2 16862827 16864404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01226 93 360 Core DNA Replication Machinery Family AT1G77470 22.939 2.68e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01226 K07478 - gmx:100799257 738.799