Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01203 ATGGCCAACGGTGATATCAGAAACATCTTATCCTACGCCTGTTTAACTGCACCAATTAATCCAAATCCTGCAGATGACTTGGAGCGTTATGTCAATAAGATGAGGATGAAGTACAGGACTTACCTGATAGAGTTTGACGTGGATCATGGTGTGGTCATGCTCCCCTACATGTTTGGACACGACTTCGGTGACCAGATAGGCTGTTATGCTACGTTGGTAGATCGTAACTTGAATAAGTTTGAAGTTTTAGTCGAAAGGATGCATGGAGGCATTTATCTGACCAAAGGCTGGCATGCATTGCGTGACTTTTACAGAGTTACTTTGGGTGGTTGGGTGACTATGATTTTGGTTGGAGATGGGAGGTTTAAAATAAGGATCATGGATAGGTTTGGTAAAAAAATGCGATGTCCCGCATTTATCCCTCTTATTGAGTTTAAGATTGATAGAAGTTACGTTCCACGCAGTTTGATTCATGATGTTCCTTTGCCCTTTGCTCATGATTTGACTAATTTTCAGTATAACTATAAAAAATGGTTGACTGCTGGTGAGATTTTGGATGGTACTATGACCCTTGCTTATACTGGATTCTGTGAGCTCACCCTTGATGTATTGACGCATGCGCTGAGGATCCTTGGTAAGATTCAAGCGTCAGGCAAGAAGGATTTGTTACCAAAGATCAAGACACTGGTTGAGGAGGGGGCTGCTTACGAGATTGAAAATGTGTTGGTGACACACAACGATCCTAAGTACAAAACCACTGAACATCGATTCAAGCTAAATCTATTGGATAAAACAAAGTTTACAAAACTCCCTAACAGCGGCATACCTAAGACTCACTTTGACTTTGTCAGATTTAGCACCATTTTGGAATCAGAAAAAGAGGACAAATTTGTTGATGTCATAGGACATGTTGTTGAAAGGGATGCCTTGAAAGTGAAAGATGTTAATGGCAAAAAGAGCAACCTCATTGACCTTACTTTGGAAGACCATGAGGGTAACCGACTCCATTGTTCACTATGGGATAGGTATGCAGATAGGATGGATGCTTACCTGACTGTCCATCCTTCTAACACTCCGGTGGTTGTTGTGCTACAGTTGGCCAAGCTGAAAAAATATTATGGTACAATGGGGGTATCTAATGCTTTTTACCAGACTAAAATGATTCTGGATGATGACTTTCCCGCCACTGTGGAGTATCTATCAAAGATCGAAGGAGCAGAAGTTTCTGTCACACAAGGTGTAAGTCAAACAAGCGGAACTATTTTGGTTTCATTGGAAGATGACATGATGCAGACCAAGCGGATGACGATTGAAGACTTGACAGAGTCATCTGATGCGTGTAACAAATGTGCTGGAAGAATCAAGCTCATAGCTGGCCGTATGTTCTGTGAAAGATGTAAACAGAGCAGAAATGCTATCCCTAGGTTTAAACTGCATGTCCAAGTTATGGACAATACTGGTTCTACAAGTTTCATTTTGTTTGACAAGAATGTGTCAACCTATGTTGGAAAAAGTGTTGGTGATTTGATTGATGCACATAACAACCGTGGTAGTGCCTATCCCTCTGACCTTGATGTTTTTGTTGGGAAAAGAATGTTGTTTAAGGTTGAGATCACTAATGGAAACCTTCTGCATAACTGGCGTAACTATGCCGTTAGGCGCACGTCTGATGATAAGGAGCTAATCACTAGGTTCATTGCTCATCATAAGATTGAGGTCTGGGATGAGGAACAGGATGCTGCTGATATCACTCTTTCAGGATGTGGTGGTGTGGACCCATCGTCCGAGGTAAGGTTGATTGGCTGTGGAGGCTCGAGCAATTCTGCATCAAAGGAAGTAGATGATGCTGTAACACCCATTAGCAAGATGCCTGGCAAAAGGACTGCTGACAGCATAGGTTCGGTTACTAAGGATGTGCAGGAAGTTGGTGAAAATTCCATCAGCAGCACTGTGAAGTTGAAGTGCGTGAAGACTGAGAAGAATCCGTGA 1989 0.4223 MANGDIRNILSYACLTAPINPNPADDLERYVNKMRMKYRTYLIEFDVDHGVVMLPYMFGHDFGDQIGCYATLVDRNLNKFEVLVERMHGGIYLTKGWHALRDFYRVTLGGWVTMILVGDGRFKIRIMDRFGKKMRCPAFIPLIEFKIDRSYVPRSLIHDVPLPFAHDLTNFQYNYKKWLTAGEILDGTMTLAYTGFCELTLDVLTHALRILGKIQASGKKDLLPKIKTLVEEGAAYEIENVLVTHNDPKYKTTEHRFKLNLLDKTKFTKLPNSGIPKTHFDFVRFSTILESEKEDKFVDVIGHVVERDALKVKDVNGKKSNLIDLTLEDHEGNRLHCSLWDRYADRMDAYLTVHPSNTPVVVVLQLAKLKKYYGTMGVSNAFYQTKMILDDDFPATVEYLSKIEGAEVSVTQGVSQTSGTILVSLEDDMMQTKRMTIEDLTESSDACNKCAGRIKLIAGRMFCERCKQSRNAIPRFKLHVQVMDNTGSTSFILFDKNVSTYVGKSVGDLIDAHNNRGSAYPSDLDVFVGKRMLFKVEITNGNLLHNWRNYAVRRTSDDKELITRFIAHHKIEVWDEEQDAADITLSGCGGVDPSSEVRLIGCGGSSNSASKEVDDAVTPISKMPGKRTADSIGSVTKDVQEVGENSISSTVKLKCVKTEKNP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01203 662 CDD RPA1_DBD_B_like 299 399 - -
Mepo2g01203 662 SUPERFAMILY DNA-binding pseudobarrel domain 39 128 IPR015300 -
Mepo2g01203 662 CDD RPA1_DBD_C 446 548 IPR047192 -
Mepo2g01203 662 SUPERFAMILY Nucleic acid-binding proteins 279 403 IPR012340 -
Mepo2g01203 662 Pfam Domain of unknown function DUF223 213 292 IPR003871 -
Mepo2g01203 662 Gene3D - 183 272 IPR012340 -
Mepo2g01203 662 Gene3D - 32 130 IPR015300 -
Mepo2g01203 662 Gene3D - 421 565 IPR012340 -
Mepo2g01203 662 Pfam Replication factor-A C terminal domain 445 540 IPR013955 -
Mepo2g01203 662 Gene3D - 274 411 IPR012340 -
Mepo2g01203 662 SUPERFAMILY Nucleic acid-binding proteins 434 554 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01203 Mepo-Chr2 16450648 16455249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01203 213 539 Core DNA Replication Machinery Family AT5G08020 21.096 2.52e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01203 - - mtr:112422829 384.03