Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01179 ATGGCATTTCACGTTGCTTGTCCAATTACATGTCGAAGAATTTGTTTCTGTTCGTTAGGGTTTCCGCGTTCTCTGAACGGAACGAAGAACGCGACGAAGGATTTTCTCGATGAGGTGAATTTGCTGAGTGATTTTCTCGGTGATTCACGGAAGGAAGATGGTGGAACGATTCAAGTTGCGGTGCCGAAAGTGGTGCCACCGCCGCCGCCGGAAATTGTTGCTGTTAGCGGTGGTGGTGGTGGTGGTGGTGATGTGGTTGATGAATCTGCATCCATGAAAGCTAAGCGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAGGCTTGAATCTGGCGATGTTGTGGATACATCGGGCAATCTTAATGGAGAAGAGCAGGGGCAATCCAATGTAAAGGTCTTTTGTCGAATGTGCAATCGTGTCGAGAATGAAGGAAGTGAGAAAGCGAAAAAGATGCTGTCGTGTAAAAGTTGTAGTAAGAAGTACCATAGGAGCTGCTTGAAAAGTTGGTCTAATAATAGAGATTTATTTCATTGGAGTTCGTGGACCTGCCGTGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCCAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCCTACCATTGTTACTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCGAAACACACAAAGTGTCACAGTTGCGCATCCAATGTCCCTGGGAATGGACTAAGCGTGAGGTGGTTTCTGGGATACACGTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAATTACTGCCCTGTTTGTCTGAAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTACATTGCCAGTGTGATGATATTAGTGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATACATGTCCTACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTACAAGAGCTTTGGAGGAGAAAGAATGTTGCTGATAAAGATTTAATTACCAGCTTGAGGGCTGCTGCTGGTTTACCAACACAAGAAGAAATATTTTCCATTTCACCATATTCTGACGATGAGGATAGCGGGCCTTTGAAGTTAAAGAGTGATTCTTCACGTTTTAAGCTCTCTTTTAAGAATTTTCCCAATAATTCACCTACCAAGATGAATGATTATGGAAAGAAATCTTCGAACAAAAAGACTGCTAAGAAAAAGGACTCTCTGTCATTCATGACCGGTAAAATTGATGCACGCCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACATAGCTTGGATGATATGCAATCTCAGAGAAATGAAGGTCCTGATATTTATTCATCACCTGCTACTGGAAGCTTGAGTCAAACTGAAGCATCTTGTCCTGTCAATCAGACAGGGATTTTGAAACGTAAGTTTGATGATGAGGTGATGGTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCAAATATTTTTGATAGTGAAGAGAGTGGAAAACGTGGTGATAAGTCTCAGAATATGAAAAAGAATAAGTTAGTTATAAATTTGGGAGCACGGAAAATTAATGTAGCTAGTTCTCCACTGTCTGACAATGCAAGCGTCCAAAGAGATCAAGATGTGGTTACTGCCAATGGAAATGAAAATCCAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGGAGCAGCTGGACATATTGATGGTAAAGGAAGTAGGGTTGATTCAGGCCAACCAAAACATTTAAAGGTTTACGGAAGAGAAGGAAACACAATCAAGTTCGGAAAAGTAAAGCCAAGTGTTTCTGAATTCAACTTCACCTCTGGTAGAGGCAATATGTCGGATGGGGGTGAAGTTGGTCCTTTAGAGGGATCTCACATCATGCGGGGAAAACGTAGTACTCATGGAATGATCAACCAAGTTGGATTAGGTGCAACGTCAAGAGGTGAAAGGACAGATTTGGCGAAGCAGTCAGAAGGTAGCTCTGATGTATATGATGAGACACATGACCATAATCACATGCCTTCACATTCTTTGCCAAAAGATTCTAAACCTTCACTGAGAATTAAAATCAAAAAGCCTATCGAAAGTCAAAATTCTCATCAGGAAGAGGAGAAGACCACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTTAAAGAAAGATCATTGTTTAATGACTCTGAAGGTAAAGAAAGATCATTGGTTGATGACTCTGAAGGTGCAAGTCAATCTCCTGGAGAGAATATAAATCATGAGAACATGGATGCAAACTGGATTTTGATGAAATTGGGAAGTGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCCGATGATTCTTGGCACAAGGGAGAGGTGACTGGCGTAGTTGAAGGCACCTCAAATCTACATGTTACTTACGATGATGGAAAAGTGAGTATCTTGGAACTCAGGAAGCAGGGAGTTCGTTTTGTTCCTCAAAAGCAAAAGAGATCGAAACCATGA 2616 0.4209 MAFHVACPITCRRICFCSLGFPRSLNGTKNATKDFLDEVNLLSDFLGDSRKEDGGTIQVAVPKVVPPPPPEIVAVSGGGGGGGDVVDESASMKAKRDALQRKGAAAMIAAEEYARRLESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSEKAKKMLSCKSCSKKYHRSCLKSWSNNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTKCHSCASNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDHCQRWVHCQCDDISDERYHQFQVDGNLQYTCPTCRGECYQVKNLEDAVQELWRRKNVADKDLITSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKSDSSRFKLSFKNFPNNSPTKMNDYGKKSSNKKTAKKKDSLSFMTGKIDARHSFEGHSDIRSLHSLDDMQSQRNEGPDIYSSPATGSLSQTEASCPVNQTGILKRKFDDEVMVSDEERKPRVVRIKSNKANIFDSEESGKRGDKSQNMKKNKLVINLGARKINVASSPLSDNASVQRDQDVVTANGNENPAHLTKGNKFALDRHDGAAGHIDGKGSRVDSGQPKHLKVYGREGNTIKFGKVKPSVSEFNFTSGRGNMSDGGEVGPLEGSHIMRGKRSTHGMINQVGLGATSRGERTDLAKQSEGSSDVYDETHDHNHMPSHSLPKDSKPSLRIKIKKPIESQNSHQEEEKTTIKGQRSKRKRPSPFKERSLFNDSEGKERSLVDDSEGASQSPGENINHENMDANWILMKLGSDAIGKRVEVHQTSDDSWHKGEVTGVVEGTSNLHVTYDDGKVSILELRKQGVRFVPQKQKRSKP 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01179 871 FunFam PHD finger family protein 275 337 - -
Mepo2g01179 871 Pfam PHD-finger 280 335 IPR019787 -
Mepo2g01179 871 ProSitePatterns Zinc finger PHD-type signature. 143 195 IPR019786 -
Mepo2g01179 871 ProSiteProfiles Zinc finger PHD-type profile. 278 337 IPR019787 -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 406 434 - -
Mepo2g01179 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 337 IPR013083 -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 691 750 - -
Mepo2g01179 871 Gene3D - 807 854 - -
Mepo2g01179 871 SMART PHD_3 142 196 IPR001965 -
Mepo2g01179 871 SMART PHD_3 280 335 IPR001965 -
Mepo2g01179 871 SMART PHD_3 197 243 IPR001965 -
Mepo2g01179 871 SUPERFAMILY FYVE/PHD zinc finger 132 197 IPR011011 -
Mepo2g01179 871 FunFam PHD finger family protein 137 252 - -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 760 780 - -
Mepo2g01179 871 ProSiteProfiles Zinc finger RING-type profile. 281 335 IPR001841 -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 464 487 - -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 682 796 - -
Mepo2g01179 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 252 IPR013083 -
Mepo2g01179 871 ProSiteProfiles Zinc finger PHD-type profile. 140 198 IPR019787 -
Mepo2g01179 871 SUPERFAMILY FYVE/PHD zinc finger 187 248 IPR011011 -
Mepo2g01179 871 MobiDBLite consensus disorder prediction 406 420 - -
Mepo2g01179 871 SUPERFAMILY FYVE/PHD zinc finger 278 336 IPR011011 -
Mepo2g01179 871 PANTHER HL01030P-RELATED 142 336 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo2g01179 PHD 6.7e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01179 - - tpra:123921045 1411.74