Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01176 ATGTCCAACCTTAACCATAATCATATGCATACATTTCCATTTCAAGCTACTTTGTTGGTTTCTTTGTTGCTAGCTCTATGTCAAATCACTTCAGGGCTAACACAATTTGAAGCCTTGTTAAAGTGGAAACAAAGTCTTCCTCAACAACCAATTCTTGATTCATGGATCATTAACAACTCTAGTTCAACACAAACACCATGTTCATGGAGAGGTATTACTTGTGATTCTAAAGGAAGTGTTACAATCATAAATTTGGCATATAGTGGACTTGAAGGAACTCTTAATCACTTAAATTTGTCGGTTTTTTCTAACCTTCTTCGTCTCGATCTTAAAACAAACAATCTCACCGGTGTCATACCTGAAAACATCGGTGTTCTTTCAAAACTTCAATTTCTTGATCTTTCTACAAATTATCTCAATGGAACTTTGCCTCTTTCTATAGCTAATTTGACTCAAGTTTATGAGCTTGATGTTTCACGAAACGACGTATCTGGTATATTAGACCATCGTTTGTTTCCTGATAGCACTGATAAGCCCAGTTCTGGGCTTATCAGTATCAGGAATTTACTTTTCCAAGATACCCTTTTGGGTGGTCGATTACCAAACGAAATAGGGAACATAAAAAACTTGACTATACTAGCACTTGATGGAAACAGTTTCTTTGGTCCTATTCCTTCATCTTTAGGAAACTGTAAACATTTAAGCATTCTGAGATTGAGTGAAAACCAATTCTCTGGCTCAATACCACCAAGTATTGGCAAATTGACCAACCTAACTGATGTAAGGTTTTTAATCAACAAACTAAATGGCACTGTGCCACAAGAATTTGGAAACCTTTCATCTTTGGTTGTTTTACATCTTGCTCAGAACAATTTCATTGGTGAGTTACCACCTCAAGTTTGCAAAAGTGGCAAACTTTTGAATTTCAGTGCATCCTATAATAGTTTCAGTGGTCCAATTCCAATAAGTCTTAAAAACTGCCCTTCTTTGTATAGAGTCAGACTTGAACACAACCAGTTAACTGGTTATGCAGATCAAGATTTTGGAGTTTATCCAAATCTTACTTACATAGATTTCAGCTATAATGAGGTGCAAGGTGCTTTATCTTCTAAATGGGGATCCTGTAAAAACTTGCAATTCCTGAATTTGGCTGGTAATTCAGTGAATGGAAAAATTCCTAGTGAGATTTTTCAATTGGAACAATTACAAAAGCTTGATCTATCCTATAACCAATTATCAGGAACTATTCCTTCACAAATTGGAAATGCTTCAAATTTGTATCATTTAAATTTGGGTGGAAATAGGCTTTCTGGTAAGGTACCAATTGAAATTGGAAAGATTTCTAATTTGCAATATTTAGACCTTTCAATGAATGCATTTTTAGGAGAAATTCCGATTCAGATAGGTGATTGTTCCAATTTGCTGAATTTAAATTTGAGTAAAAATCACTTGAATGGCACAATTCCTTTCCAAATTGGAAACCTTGGATCATTACAAGTCTTTTTGGATTTGAGTTACAATTCATTTTCAGGGGAAATTCCTTCTAATATTGGCAAGCTTTCAAATTTGATTAGCTTGAATATCTCAAACAACAATTTGTCAGGTAAAATACCTAATGAAATTAGTGGAATGTTGAGTTTGTCAAGTCTTAACCTCTCTTACAATCATTTAGAGGGCGATGTTCCTAAGAGTGGCATTTTCAAATTAAACTCTTCTCGTGCAATTGACTTGAGCAACAACCAAGGCCTATGTGCTTGTTTCAAAGGCTTGACACCTTATAATGTTTCATCAAGTAACAAAAAAAAGGTTGTGATTCCTATAGTTGCTTCTTTAGGAGGTGCGCTTTTTCTTTCATTGGTATGTGTTGGCATAATTTTGTTATGCTACAAAAAAAAATCAAGATCTTTAAAAAAGTCTTCATTTAAGATACCAAATCCATTTTCAATTTGGTACTTCAATGGAAGAGTTGTATACAATGACATAATTGAAGCTACCAACAGTTTTGACAATAAGTATTGCATTGGTGAAGGCGCATTTGGAAATGTTTACAAAGCCGAACTGAAAGGAGGTCAAATATTCGCGGTGAAAAAGCTGAAATGTGATGAAGAAAACTTAGACACTGAGAGTATAAAAACATTTGAAAGTGAGGTTGAAGCTATGACAGAAACAAGGCACAGAAACATTGTGAAGCTTTATGGATTTTGTTGTGAAGGGATGCACACATTTCTTGTTTATGAGTATATGGATAGAGGTTGTTTAGAGGATATGTTGGTTGATGATAAGAGAGCGTTGGAACTTGATTGGTCTAAACGGTTTGATATTGTTAAAGGCGTTGCGAGTGCTCTTTCTTATATGCATCATGATTGTTCTCCAGCTTTGATTCATAGAGATATATCAAGCAAGAATGTTTTGTTATCTTACAATCTTGAAGCTCATGTCTCAGATTTTGGTACTGCAAGGTTTCTTAAGCCAAATTCGCCTATTTGGACTTCATTTGCTGGCACATATGGTTATGCTGCTCCAGAGCTAGCTTACACAATGGCAGTGACAGAAAAATGTGATGTATTCAGCTTTGGTGTTTTAGCATTTGAGATTCTAACAGGAAAGCACCCTGGTGATCTTGTTTCTTACATACAAACATCAAATGATCAAAAGATTGACTTCAAAGAAATTTTAGACCCTCGCTTACCTTCTCCTCCAAGGAACATGTTGAAGGAATTGGAATTGGTTGCAAATTTAGCTCTTTCTTGTTTACATACACACCCTCAATCTAGACCTACTATGAGAAGTGTAGCCCAATCTCTAGAAATGGAGACCACATAA 2823 0.3525 MSNLNHNHMHTFPFQATLLVSLLLALCQITSGLTQFEALLKWKQSLPQQPILDSWIINNSSSTQTPCSWRGITCDSKGSVTIINLAYSGLEGTLNHLNLSVFSNLLRLDLKTNNLTGVIPENIGVLSKLQFLDLSTNYLNGTLPLSIANLTQVYELDVSRNDVSGILDHRLFPDSTDKPSSGLISIRNLLFQDTLLGGRLPNEIGNIKNLTILALDGNSFFGPIPSSLGNCKHLSILRLSENQFSGSIPPSIGKLTNLTDVRFLINKLNGTVPQEFGNLSSLVVLHLAQNNFIGELPPQVCKSGKLLNFSASYNSFSGPIPISLKNCPSLYRVRLEHNQLTGYADQDFGVYPNLTYIDFSYNEVQGALSSKWGSCKNLQFLNLAGNSVNGKIPSEIFQLEQLQKLDLSYNQLSGTIPSQIGNASNLYHLNLGGNRLSGKVPIEIGKISNLQYLDLSMNAFLGEIPIQIGDCSNLLNLNLSKNHLNGTIPFQIGNLGSLQVFLDLSYNSFSGEIPSNIGKLSNLISLNISNNNLSGKIPNEISGMLSLSSLNLSYNHLEGDVPKSGIFKLNSSRAIDLSNNQGLCACFKGLTPYNVSSSNKKKVVIPIVASLGGALFLSLVCVGIILLCYKKKSRSLKKSSFKIPNPFSIWYFNGRVVYNDIIEATNSFDNKYCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDTESIKTFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGCLEDMLVDDKRALELDWSKRFDIVKGVASALSYMHHDCSPALIHRDISSKNVLLSYNLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLPSPPRNMLKELELVANLALSCLHTHPQSRPTMRSVAQSLEMETT 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01176 940 SUPERFAMILY RNI-like 247 587 - -
Mepo2g01176 940 Gene3D Transferase(Phosphotransferase) domain 1 748 940 - -
Mepo2g01176 940 PANTHER LEUCINE RICH REPEAT KINASE 2 228 937 - -
Mepo2g01176 940 ProSitePatterns Tyrosine protein kinases specific active-site signature. 793 805 IPR008266 GO:0004672|GO:0006468
Mepo2g01176 940 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Mepo2g01176 940 SUPERFAMILY Protein kinase-like (PK-like) 641 936 IPR011009 -
Mepo2g01176 940 ProSitePatterns Protein kinases ATP-binding region signature. 674 697 IPR017441 GO:0005524
Mepo2g01176 940 Gene3D Ribonuclease Inhibitor 115 180 IPR032675 -
Mepo2g01176 940 FunFam Leucine-rich repeat receptor protein kinase MSP1 630 747 - -
Mepo2g01176 940 SMART serkin_6 668 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01176 940 FunFam MDIS1-interacting receptor like kinase 2 748 940 - -
Mepo2g01176 940 PRINTS Leucine-rich repeat signature 520 533 - -
Mepo2g01176 940 PRINTS Leucine-rich repeat signature 402 415 - -
Mepo2g01176 940 Pfam Protein kinase domain 671 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01176 940 Gene3D Ribonuclease Inhibitor 28 114 IPR032675 -
Mepo2g01176 940 Gene3D Ribonuclease Inhibitor 196 255 IPR032675 -
Mepo2g01176 940 FunFam Nuclear pore complex protein NUP107 33 173 - -
Mepo2g01176 940 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 280 596 - -
Mepo2g01176 940 SMART LRR_typ_2 520 543 IPR003591 -
Mepo2g01176 940 SMART LRR_typ_2 399 423 IPR003591 -
Mepo2g01176 940 SMART LRR_typ_2 126 150 IPR003591 -
Mepo2g01176 940 SMART LRR_typ_2 447 471 IPR003591 -
Mepo2g01176 940 SMART LRR_typ_2 544 569 IPR003591 -
Mepo2g01176 940 SMART LRR_typ_2 279 303 IPR003591 -
Mepo2g01176 940 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 270 - -
Mepo2g01176 940 Gene3D Phosphorylase Kinase; domain 1 630 747 - -
Mepo2g01176 940 SUPERFAMILY L domain-like 62 246 - -
Mepo2g01176 940 ProSiteProfiles Protein kinase domain profile. 668 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01176 940 Gene3D Ribonuclease Inhibitor 349 593 IPR032675 -
Mepo2g01176 940 Pfam Leucine rich repeat 502 557 IPR001611 GO:0005515
Mepo2g01176 940 Pfam Leucine rich repeat 401 459 IPR001611 GO:0005515
Mepo2g01176 940 Gene3D Ribonuclease Inhibitor 256 348 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01176 Mepo-Chr2 15890455 15893778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01176 14 841 Receptor kinase-like Gene Family AT4G08850 40.064 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo2g01176 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01176 - - aprc:113866080 1419.06