Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01145 ATGAATATGGATAACCAAAGAAAGAAAAGTGTAGGGCACAAAAAGATTGAGATCAAGAAGATTGACAAAGCATCCAATAGACAAGTCACATTCTCAAAGAGAAGACAAGGTCTATTCAAAAAAGCAAGTGAACTTTGTGTCTTATGTGATGCACATGTAGCCATGGTTGTGTTTTCCCCTAGTGACAAACTATTTTGCTTTGGTAAACCTAATAACATCGACACAATTCTTAATAGCTACCTCAACGAAACCACTGAGTTTGAGGATGTAAATTCATTAGATAATTCTTCAACATATGAACATGAAGAGTACAATAGACAATATGAGGAGGCATTAAAAATGTTGGAGTTGGAGAAGAAGAAACTAGCTGATGTTAAAATTTTGAACAAAAGTGATTGGTGGAATGATTCCATTGATGATATGAGTATTGAAGAGCTTCAACAATTTATGGTGTCAATTAAAGAGTTAAGGAGTAACCTTGATCAACCAATGCTTTGCAGGACCATGGAATTTCTTGATCTTGATGAATGA 531 0.3446 MNMDNQRKKSVGHKKIEIKKIDKASNRQVTFSKRRQGLFKKASELCVLCDAHVAMVVFSPSDKLFCFGKPNNIDTILNSYLNETTEFEDVNSLDNSSTYEHEEYNRQYEEALKMLELEKKKLADVKILNKSDWWNDSIDDMSIEELQQFMVSIKELRSNLDQPMLCRTMEFLDLDE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01145 176 SUPERFAMILY SRF-like 12 85 IPR036879 GO:0003677|GO:0046983
Mepo2g01145 176 SMART madsneu2 11 70 IPR002100 GO:0003677|GO:0046983
Mepo2g01145 176 Coils Coil 101 125 - -
Mepo2g01145 176 PRINTS MADS domain signature 13 33 IPR002100 GO:0003677|GO:0046983
Mepo2g01145 176 PRINTS MADS domain signature 33 48 IPR002100 GO:0003677|GO:0046983
Mepo2g01145 176 PRINTS MADS domain signature 48 69 IPR002100 GO:0003677|GO:0046983
Mepo2g01145 176 FunFam Agamous-like MADS-box protein AGL62 23 89 - -
Mepo2g01145 176 Gene3D - 24 95 IPR036879 GO:0003677|GO:0046983
Mepo2g01145 176 PANTHER MADS BOX PROTEIN 14 161 - -
Mepo2g01145 176 ProSiteProfiles MADS-box domain profile. 11 71 IPR002100 GO:0003677|GO:0046983
Mepo2g01145 176 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 20 67 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01145 Mepo-Chr2 15375802 15376332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01145 8 157 Type I MADS-box Gene Family AT5G60440 39.623 2.35e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo2g01145 SRF-TF 3.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01145 - - cam:101502875 188.348