Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01140 ATGCCCTTAGGCACGGCCATACATAACATAGAAATACCACTTGGAAAGGGTGGACAATTAGCTAGAGCGGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTTTGGAGAGCGTCCTGTAGTAAGAGGAGCAGTTATGAACCCTGTAGACCACCCACATGGTGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAAGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAG 321 0.4424 MPLGTAIHNIEIPLGKGGQLARAAGAVAKLIAKEGKSATLKLPFGERPVVRGAVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALGRRSRKKNKYSDNLILRRRSK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01140 106 PANTHER RIBOSOMAL PROTEIN L2 44 105 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mepo2g01140 106 SMART Ribosomal_L2_C_2 1 83 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo2g01140 106 SUPERFAMILY Translation proteins SH3-like domain 1 103 IPR008991 -
Mepo2g01140 106 FunFam 50S ribosomal protein L2 26 106 - -
Mepo2g01140 106 MobiDBLite consensus disorder prediction 90 106 - -
Mepo2g01140 106 Pfam Ribosomal Proteins L2, C-terminal domain 45 81 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo2g01140 106 ProSitePatterns Ribosomal protein L2 signature. 48 59 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mepo2g01140 106 MobiDBLite consensus disorder prediction 54 106 - -
Mepo2g01140 106 Gene3D Ribosomal protein L2, domain 3 8 105 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01140 Mepo-Chr2 15330749 15331177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01140 1 66 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 32.110 2.05e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01140 K02886 - jre:26380847 190.274