Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01133 ATGGAGAGGAGCATTGGAAAACCCTGTGGGATTTGTGGGAAATGGTTCGCCAGTTGGAAAGCCATTGGAGGCCACATGAGATCTCACTTGGTCAAATTGCCGATTCCCCCAAAGCTCGAGACTAACAATCAAGCTCATCATAATTCATCAGATTTAACCCAGCATCCAAATCAAACTGCTTCCTCACTAACTTTCCATCCTGAAGAACAACAAACACAGAACTTCCGATCTATGAAACACAACTTCTCTGCTTTCTCTGCAGACTCAAACAGAGAAAACGAATCTGTGTCTTACCCGAAAACCCCAACCCGCAAAAGATCCAAATGCCACCGCAAATTTAATGTGGTGGCTGATACAAAAGATCTGCCAATAGATCCAGATGTTATGATGTTATGGGGGTTTTACAAAGATGCACAAAAGAGGGAAGAGATCAAGAAACAAAAAATAAAGGAAACTAACAAAATGAAGGAAAAAGACATTGAAGGCGGTAGAGATGACTTGATTATTCAAGCTCATACTCAAGCCAGCTTCAAGTGTCAGAGGTGCGGAAAAATGTTCCGATCTTGTCAAGCTCTTTGTGGGCACAAAGCATACTGCAAAAGTGACAGCGATGGTGAAGATCAGAAACCTTTTCAGTGCCCATATTGCAACAGAGAGTTCAAGACTGCTCAAGCACTCGGTGGACACAAGAGGGTACACTTTTTAAGTGCTAATGAATTTCGAAGTGTGTCAGTGGATCTCAATTTTCCAGATCCTAAATGA 762 0.4213 MERSIGKPCGICGKWFASWKAIGGHMRSHLVKLPIPPKLETNNQAHHNSSDLTQHPNQTASSLTFHPEEQQTQNFRSMKHNFSAFSADSNRENESVSYPKTPTRKRSKCHRKFNVVADTKDLPIDPDVMMLWGFYKDAQKREEIKKQKIKETNKMKEKDIEGGRDDLIIQAHTQASFKCQRCGKMFRSCQALCGHKAYCKSDSDGEDQKPFQCPYCNREFKTAQALGGHKRVHFLSANEFRSVSVDLNFPDPK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01133 253 Gene3D Classic Zinc Finger 170 233 - -
Mepo2g01133 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Mepo2g01133 253 MobiDBLite consensus disorder prediction 41 59 - -
Mepo2g01133 253 MobiDBLite consensus disorder prediction 38 59 - -
Mepo2g01133 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 210 IPR013087 -
Mepo2g01133 253 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 252 IPR044303 GO:0006355
Mepo2g01133 253 MobiDBLite consensus disorder prediction 83 104 - -
Mepo2g01133 253 ProSitePatterns Zinc finger C2H2 type domain signature. 213 233 IPR013087 -
Mepo2g01133 253 Pfam C2H2-type zinc finger 177 199 - -
Mepo2g01133 253 Pfam C2H2-type zinc finger 211 233 - -
Mepo2g01133 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 211 233 IPR013087 -
Mepo2g01133 253 SMART c2h2final6 177 197 IPR013087 -
Mepo2g01133 253 SMART c2h2final6 211 233 IPR013087 -
Mepo2g01133 253 SMART c2h2final6 7 29 IPR013087 -
Mepo2g01133 253 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Mepo2g01133 253 MobiDBLite consensus disorder prediction 83 102 - -
Mepo2g01133 253 Pfam C2H2-type zinc finger 8 29 - -
Mepo2g01133 253 SUPERFAMILY beta-beta-alpha zinc fingers 177 233 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01133 Mepo-Chr2 15234207 15234968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01133 9 252 C2H2 Transcription Factor Family AT1G02030 26.038 1.74e-17 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g01133 zf-C2H2_6 0.0026 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01133 - - mtr:112420782 305.064