Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01114 ATGACAACCAAGGTTCAAGTCTTCGAAAGCTCCATCATTCCTAAATATGATGTTTCTTTGACCAAGCTTGCTGATGTTTGTGCTCATACCAACGATTATGACTATTTAGTTGATGTTCTTGGCTTGATGACTGGTATATCAAATGAGAGGGAGTATATTAGAGATGGGAAGTTGACCAAGATGGTCGTTTTTCAACTGACTGATGATAGTGGAAGGTGTGAGTGTGCACTCTTTGGAAAGTATGTTGATGACTTGAACAAGCTCATGGGAAAGGCTGCTGATGGGATGCCTGTTGTTTTGGTGCAGTTTGCCAAAGTGAAAATCTTCAAGGATAAGGCATCCCTTCAGAATGTCTTGAACACCACTCGGATTTTGATAAATCCTCCGATAGAGGAGGCGGCTCAAGTTAAGAAGAGTGTGTCTGCTGTTGGTATGGATCTCTCTGTTGTTCCAAAGCTTGGTCCACGTGTAAGATTGTCGGTTCAGGACGATTTCCTACGCACGCATCCTAAGAAGACCCTGGCTCAGTTGCACGATACTCCCGAGGATGGAACATTTGTTGTTTATGCGACTGTTAATGGCTTTGTGGATGGCGATGATTGGTGGTATCCGACTTGCAAATGCCATCGGAGTGTTGCTCCTGATTCCGGTGCGTACTACTGTAAGGGATGTGTCAAGCACGTTTTTCAGATGGTGCCTAGGTATAGGGTTAAGATTAATGTTGGTGATGCAACGAGCGTAGCAGTGTTTGTTATGTTTGATGGTAATGTCCAGAATATACTGAACTTGCCCTGCAGTTCCCTTGTGTCTGCCTCAAAGGCTGAGAATGCTGGGTTCTACCCATCTAAGTTTGCCAAACTGAAGGATAAGAAAATGTTGTTTAAGGTTGAGAAATATTATGGTCCAAGCATTTTTTTTGATGGGTCATTTAGGGTTAAGAGGGTATGTGATGAACCTTCTGTCATTCAATCCTTTGATTCTGTTGGTGTTGAGTCCAATCCATCTAAGCCGTTGTCAAAGAATCTTGTGCCCAAAACCTCCGCCTTGCTTGATGAACCTGAAGAAGAAGACCCCCAGGCCGATGACTTTGTTTCTAATGTTGTTGTTGCTCCAAGGAGTGTGATTGAAATTGCTGATGAGGAATTCTCCAATGATCTCCCAACTGATGTTGATGATCTTGCAATTGTGAGTGAGGTTGTAGCTGCCTTTGGTGTTGCTGGTTCTGCTGAGAGTACTTCCTTGGCTGTTGGTGTTGAACATGAATTTGCTTTGAAGTCCAGTGGATGTGGTGCCAAAAGAAATCTTTCATCTGCCTTTGTTGAAGTTGATTCTGATCATGAGACTCTGGCCTAG 1353 0.4346 MTTKVQVFESSIIPKYDVSLTKLADVCAHTNDYDYLVDVLGLMTGISNEREYIRDGKLTKMVVFQLTDDSGRCECALFGKYVDDLNKLMGKAADGMPVVLVQFAKVKIFKDKASLQNVLNTTRILINPPIEEAAQVKKSVSAVGMDLSVVPKLGPRVRLSVQDDFLRTHPKKTLAQLHDTPEDGTFVVYATVNGFVDGDDWWYPTCKCHRSVAPDSGAYYCKGCVKHVFQMVPRYRVKINVGDATSVAVFVMFDGNVQNILNLPCSSLVSASKAENAGFYPSKFAKLKDKKMLFKVEKYYGPSIFFDGSFRVKRVCDEPSVIQSFDSVGVESNPSKPLSKNLVPKTSALLDEPEEEDPQADDFVSNVVVAPRSVIEIADEEFSNDLPTDVDDLAIVSEVVAAFGVAGSAESTSLAVGVEHEFALKSSGCGAKRNLSSAFVEVDSDHETLA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01114 450 CDD RPA1_DBD_C 176 296 IPR047192 -
Mepo2g01114 450 SUPERFAMILY Nucleic acid-binding proteins 171 296 IPR012340 -
Mepo2g01114 450 Gene3D - 13 148 IPR012340 -
Mepo2g01114 450 CDD RPA1_DBD_B_like 38 140 - -
Mepo2g01114 450 PANTHER OS03G0429900 PROTEIN 105 297 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo2g01114 450 Gene3D - 162 301 IPR012340 -
Mepo2g01114 450 Pfam Replication factor-A C terminal domain 186 297 IPR013955 -
Mepo2g01114 450 SUPERFAMILY Nucleic acid-binding proteins 18 145 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01114 Mepo-Chr2 14954908 14957222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01114 9 261 Core DNA Replication Machinery Family AT5G08020 23.792 7.06e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01114 - - mtr:11425976 533.487