Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01099 ATGCCCTTAGGCACGACCATACATAACATAGAAATAACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGACAACATTAAAATTACCTTCTGGAGAGGTTCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCACCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTTGGAGAATTAAGAGCTATTGCAATTCTTTTTCTCATTGCTGGTCATATGTATAGAACTAACTTCGGTATTGGGCACAGTATAAAAGATATTTTAGAAGCACATATTCCTCCGGGGGGTAGATTGGGGCGTGGACATAAGGGTCTTTATGACACAATCAATAATTCAATTCATTTTCAATTAGGCCTTGCTCTAGCCTCATTAGGGGTCATTACTTCTTTGGTAGCTCAACACATGTACTCTTTGTCTGCTTATGCGTTTATAGCGCAAGACTTTACTACTCAAGCTGCGTTATATACTCATCATCAATACATTGCAGGATTTATTATGACAGGGGCTTTTGCTCATGGAGCGATATTTTTTATTCGCGATTACAATCCCGAACAGAATGAGGATAATGTATTGGCAAGAATGTTAAAGCACAAAGAAGCTATCATCTCCCATTTAAGTTGGGCCAGCCTATTTCTGGGGTTCCATACTTTGGGACTTTATGTCCATAATGATGTCATGCTTGCTTTTGGGACTCCGGAGAAACAAATCTTGATCGAACCTATATTTGCCCAATGGATACAATCTGCTCATGGTAAAACTTCATATGGGTTCGATGTACTTTTATCTTCAACGAATAGTCCGGCGCTCAGTGCGGGGCGAAGCATATGGTTGCCTGGTTGGTTAAATGCTATTAATGAGAATAGTAATTCTCTATTCTTAACAATAGGCCCTGGAGACTTCTTGGTTCATCATGCTATTGCTCTTGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTTTGGATGCACGCGGTTCCAAGTTAATGCCGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGCGATGGTCCGGGACGAGGCGGTACTTGTGATATTTCGGCTTGGGACGCATTTTATTTGGCAGTTTTCTGGATGTTAAATACCATTGGATGGGCAAAGTTAGAAGCACTACCGCGTAATAGTGCACCTACACGTCTTCGTCGACGTTGTTTTTCGACCGGAAGACCGAGAGCTAATTATCGAGACTTTGGATTATCTGGACACATACTTCGTGAAATGGTTCACGAAGATGTATTAGAAATGATACCTTGGGATGGATGTAAAGCTAAGCAAATAGCTTCTGCCCCAAGAACAGAGGACTGTGTTGGTTGTAAGAGGTGTGAGTCTGCTTGTCCGACGGATTTCTTAAGTGTTCGGGTTTATTTAGGGCCTGAAACAACTCGAAGTATGGGTCTAGCTTATTGA 1620 0.421 MPLGTTIHNIEITLGKGGQLARAAGAVAKLIAKEGKSTTLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALGELRAIAILFLIAGHMYRTNFGIGHSIKDILEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLSAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLKHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTNSPALSAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWAKLEALPRNSAPTRLRRRCFSTGRPRANYRDFGLSGHILREMVHEDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSMGLAY 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01099 539 FunFam 50S ribosomal protein L2 62 126 - -
Mepo2g01099 539 Gene3D Ribosomal protein L2, domain 3 63 124 IPR014726 -
Mepo2g01099 539 Gene3D - 436 480 - -
Mepo2g01099 539 SMART Ribosomal_L2_C_2 1 119 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo2g01099 539 Gene3D Photosystem I PsaA/PsaB 125 435 IPR036408 -
Mepo2g01099 539 FunFam 50S ribosomal protein L2 1 61 - -
Mepo2g01099 539 Pfam 4Fe-4S binding domain 503 521 IPR017896 -
Mepo2g01099 539 Gene3D - 481 539 - -
Mepo2g01099 539 Gene3D - 1 62 IPR014722 -
Mepo2g01099 539 SUPERFAMILY Photosystem I subunits PsaA/PsaB 126 437 IPR036408 -
Mepo2g01099 539 ProSitePatterns Ribosomal protein L2 signature. 84 95 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mepo2g01099 539 ProSitePatterns Photosystem I psaA and psaB proteins signature. 406 415 IPR020586 -
Mepo2g01099 539 ProSitePatterns Ribosomal protein S14 signature. 453 476 IPR018271 GO:0003735|GO:0005840|GO:0006412
Mepo2g01099 539 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 436 484 - -
Mepo2g01099 539 NCBIfam 50S ribosomal protein L2 1 122 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 216 242 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 364 382 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 264 286 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 422 443 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 177 200 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 120 138 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 PRINTS Plant photosystem I psaA and psaB protein signature 395 415 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 SUPERFAMILY Translation proteins SH3-like domain 1 122 IPR008991 -
Mepo2g01099 539 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 497 526 IPR017896 -
Mepo2g01099 539 Pfam Ribosomal Proteins L2, C-terminal domain 1 117 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo2g01099 539 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 506 517 IPR017900 -
Mepo2g01099 539 Pfam Photosystem I psaA/psaB protein 126 437 IPR001280 GO:0009579|GO:0015979|GO:0016020
Mepo2g01099 539 Pfam Ribosomal protein S14p/S29e 438 481 IPR001209 GO:0003735|GO:0005840|GO:0006412
Mepo2g01099 539 SUPERFAMILY 4Fe-4S ferredoxins 496 525 - -
Mepo2g01099 539 PANTHER OUTER MEMBRANE PROTEIN, OMPA-RELATED 126 388 - -
Mepo2g01099 539 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01099 Mepo-Chr2 14760672 14765937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01099 1 102 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 45.872 4.71e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01099 K02690 - bna:125598968 631.328