Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01097 ATGGACATGAATTCAAATCATACTCCTGTTCTCACGGACAGTGCTCCGATAACAAATTCAAGGCTGCATTCCAATTTGTTGCCTTATTCCCATACTGGTGCAACCTTTTCACACGGTATGCTGTTGAATATCCCAAGGAAGAAGACCGGAATTCTTGAAGATGTTTTTTCTTGTGGTTGGTTGGATGCCATGAAATCATCTTCACCTCCACCGAAGTATATAACAAAGGATGTTAATCACGGTTTTTCATCATCTGAATCTGATCCTTACTTTAACTGGCTGCTAAAATATCCATCAGCACTTGCATCTTTTGATCAAATAACAAACTTCGCAAAAGGCAAAAGAATTGCATTATTTTTGGACTACGATGGAACTCTTTCACCAATTGTTGATAATCCTGACTGTGCTTTCATGTCAGACAATATGCGTGCTGCTGTTAAAAAGGTGGCAGAGTATTTCCCAACAGCAATAATTAGTGGAAGAAGTCGCGACAAGGTGCATGAATTTGTAGGACTAACAGAACTCTATTACGCTGGTAGCCATGGAATGGACATCATTGGCCCTGTTAGACAATCTCAATCTGTATCACATAACCACCCTAATTGCATCATTAAGTCTACAGACAAGCAGGGGAAGAAGGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCAATGATTAATGAGGTACTTAACTCTCTCATTGAGTGTACAAGAGATATCAAAGGAGCAAAAATTGAGAACAATAAATTTTGTGTATCTGTACATTACCGCAACGTGGATGAGAAGAGCTGGGATTTGGTGGGGCGTCGAGTTAATGATGTTCTTAAGGGCTTTCCACGTTTGCGGTTAACTCATGGTCGCAAGGTTTTAGAGGTCCGACCTGTGATTAACTGGGATAAGGGAAAAGCGGTCACTTTTTTACTCGAGTCACTTGGACTTAATAATTGTGATGATGTGCTTCCTATATATATCGGCGATGATCGCACGGATGAAGATGCATTTAAGGTTTTGAGAGAGGGAAATAAAGGTTATGGGATTTTAGTGTCTTCAGCACCAAAGGAAAGCAATGCAAGTTACTCTCTTCGTGATCCATCCGAGGTTATGGAATTTCTCAAGTCACTTGTGGTATGGAAGCAAATCCCCTTAAAAAGCCATATATAG 1164 0.4029 MDMNSNHTPVLTDSAPITNSRLHSNLLPYSHTGATFSHGMLLNIPRKKTGILEDVFSCGWLDAMKSSSPPPKYITKDVNHGFSSSESDPYFNWLLKYPSALASFDQITNFAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVHEFVGLTELYYAGSHGMDIIGPVRQSQSVSHNHPNCIIKSTDKQGKKVNLFQPAAEFLPMINEVLNSLIECTRDIKGAKIENNKFCVSVHYRNVDEKSWDLVGRRVNDVLKGFPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNASYSLRDPSEVMEFLKSLVVWKQIPLKSHI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01097 387 SUPERFAMILY HAD-like 117 378 IPR036412 -
Mepo2g01097 387 NCBIfam trehalose-phosphatase 216 376 IPR003337 GO:0003824|GO:0005992
Mepo2g01097 387 CDD HAD_TPP 117 370 - -
Mepo2g01097 387 Pfam Trehalose-phosphatase 119 366 IPR003337 GO:0003824|GO:0005992
Mepo2g01097 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 380 IPR044651 GO:0004805|GO:0005992
Mepo2g01097 387 Gene3D - 116 205 IPR023214 -
Mepo2g01097 387 Gene3D - 224 384 IPR023214 -
Mepo2g01097 387 FunFam Trehalose 6-phosphate phosphatase 116 204 - -
Mepo2g01097 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Mepo2g01097 387 NCBIfam HAD-IIB family hydrolase 118 339 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01097 Mepo-Chr2 14738914 14742876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01097 110 375 Trehalose Biosynthesis Gene Families AT1G70290 26.148 3.44e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01097 K01087 - gmx:100819495 679.093