Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01094 ATGGCTCGCGGGAAGGTTCAGCTAAGGAGAATTGAGAACCCAGTGCACAGGCAAGTGACTTTCTGTAAGCGCCGAGCGGGGCTTTTGAAGAAGGCTAAGGAGCTATCCGTGCTTTGCGATGCTGAAATTGGTCTTGTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACCAAAGGAACCATGCAAGGGCTAATAGAGAAGTACTTGAAGTTCACACGAGGGAGTCAACCTGAAGTGGTAACTGAAGCACGTCCTCTTGTTTTGGATGCTAAAGAGGAAACCAATGTGCTCAAGCAAGAGATCGATACCTTGCAAAAGGGTATCAGGTATTTGTTTGGAGGAGGATTAGGGACTATGGCAATGGATGAGTTGCAAGTTCTTGAAAAGAACCTCGAAATCTGGATGTATCATGTTCGCTCAATGAAGATGAACATTATGTCACAAGAAATCCAAACTTTGAGGGACAAGGAGGGAACACTTAAGGCGGCAAATAAGTTTCTCCACGATTTGGTGTTGGAGAATACTTCCGTCGCTAACTTTGTTCCATTTGCTACTGATACTTCGTTCCCACTAATTATACAAGATGGGATTTTTCAGCTCTAG 609 0.4466 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELATKGTMQGLIEKYLKFTRGSQPEVVTEARPLVLDAKEETNVLKQEIDTLQKGIRYLFGGGLGTMAMDELQVLEKNLEIWMYHVRSMKMNIMSQEIQTLRDKEGTLKAANKFLHDLVLENTSVANFVPFATDTSFPLIIQDGIFQL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01094 202 SUPERFAMILY SRF-like 1 74 IPR036879 GO:0003677|GO:0046983
Mepo2g01094 202 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 148 - -
Mepo2g01094 202 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Mepo2g01094 202 Pfam K-box region 93 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mepo2g01094 202 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 56 IPR002100 GO:0003677|GO:0046983
Mepo2g01094 202 Gene3D - 15 77 IPR036879 GO:0003677|GO:0046983
Mepo2g01094 202 ProSiteProfiles K-box domain profile. 89 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01094 Mepo-Chr2 14702632 14710513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01094 1 202 MADS-box Gene Family AT1G71692 61.137 2.56e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mepo2g01094 K-box 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01094 - - mtr:25491856 349.747