Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01092 ATGAGTAGTAATCACTTGTATGTTCATCTAGTACTAGATTATAAAAGAGAGGAGAATATGAATACTTTTTCTCATGTTCCCCCGGGTTTTAGGTTCCATCCCACAGATGAGGAACTTGTGGATTACTACCTTAGGAAGAAAATTGCTTCAAGAACGATTGATCTTCATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTGAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAGTGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGTACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATAGTAAGCATAATTTGATAGGAATGAGGAAAACATTGGTGTTTTATAAAGGTCGAGCTCCCAATGGACAAAAGTCAGATTGGATAATGCATGAGTATAGGCTTGAAACAGATGAAAATGGTACACCACAGGCAAACCTTCAACACACACCACTCACGCCTAAGGTTGGACGTTTGGAATGTGACTTGGTTGGGATAGTACTGGAAGAAGGATGGGTTGTATGTAGAGTATTCAGGAAGAGAGTAACAACAACAATTCGAAAAATGAGTGAGCATGACTCTCCTTGTTGGTATGAAGACCAAGTTTCATTCATGCAAGATATGGACTCACCAAATCAAACCTCTCAATCCAATTTGATTTACCAACAATTACCATCATATCCTTGCAAAAAAGAGCTAGATAATTTACCATTCCAAAACTTTTCTCGTGACCATTTTCTTAATCTTCCACTTCTAGAGAGTCCAAAGCTTGTTCAATCTTCTTCAAACCTAACCTCTAATCCAATGGTTACAACATATGACACTACAGATCATTCAATTTCTATGCTTCCTTCATCAATGCTCTTGCAAGAAGAACAAGTCCTACAAAGTGGTAATCAACAAAACTTTCATGGTATGTATGGAAACAATTCCAATGTTGAACAAGGTATGGTTGATGATCAATTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCGCAACTTAGTCAAGATGCATCCAAAGAGAATAATAACAACATCTTTCATGGCAATATTGAATTCAGAAATTTGGAGAAACAAGAAATGGTGCCTCATGAAAATGCCTCTACATCAAATTTGTGGAAATAG 1188 0.3662 MSSNHLYVHLVLDYKREENMNTFSHVPPGFRFHPTDEELVDYYLRKKIASRTIDLHVIKDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQANLQHTPLTPKVGRLECDLVGIVLEEGWVVCRVFRKRVTTTIRKMSEHDSPCWYEDQVSFMQDMDSPNQTSQSNLIYQQLPSYPCKKELDNLPFQNFSRDHFLNLPLLESPKLVQSSSNLTSNPMVTTYDTTDHSISMLPSSMLLQEEQVLQSGNQQNFHGMYGNNSNVEQGMVDDQFTDWRVLDKFVASQLSQDASKENNNNIFHGNIEFRNLEKQEMVPHENASTSNLWK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01092 395 Gene3D NAC domain 35 202 IPR036093 GO:0003677|GO:0006355
Mepo2g01092 395 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 300 - -
Mepo2g01092 395 FunFam Nac domain-containing protein 86 35 175 - -
Mepo2g01092 395 Pfam No apical meristem (NAM) protein 27 154 IPR003441 GO:0003677|GO:0006355
Mepo2g01092 395 SUPERFAMILY NAC domain 22 199 IPR036093 GO:0003677|GO:0006355
Mepo2g01092 395 ProSiteProfiles NAC domain profile. 26 199 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01092 Mepo-Chr2 14659245 14662647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01092 20 376 NAC Transcription Factor Family AT1G62700 53.418 1.09e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g01092 NAM 4.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01092 - - gmx:100815845 508.064