Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01045 ATGTCCATCGCAAAGGCATCTCAATCTCAAGTTGAAGCTCGACCCGAATCGATAACAAAACGAAGCTCGAGAAAGGGTGACTCCGTATTTCACGGAGTCAGGAAACGTAGCTGGGGACGCTACGTTTCTGAGATAAGGCTGCCAGGTCAGAAAACTCGAATATGGCTTGGATCATTCGAGTCGGCTGAAATGGCAGCCCGTGCTTATGACTCAGCAGCTTTCTTCTTGAAAGGAAATTCAGCTAGTCTTAATTTTCCTGAAGATGTTGAGTTTCTACCACGTCCTCTTTCTTCTTCTAGGAGAGATATTCAATCTGCTGCTTCTAAAGCAGCTCATCAACGAAACCACCAACAACAACAAGAACAATTACGTGGAGTTACACCCTCTTCTTCTTCTGTGGAAACAAAAATGAATGAAAATAATAATATTATCAATACTAATAGTAGTGATGATATTATTACTAGTGAAAATAATAATGTTAATGATTTTTCCATTGAGATGATGGAGTGGTGGAAAGAAGAAGAGTGTGTTTCGACGACGTCGTTTTGGGATGTCAAAGATGCTCCTCTAATGAGCCCAACAAGGGTGGGGTCCATTTTTGGAGATATGATGACATGGAACGAAGTTTTCAATTTCAATGATGATAATTCTTTAGTATATGTACCGTAG 669 0.4021 MSIAKASQSQVEARPESITKRSSRKGDSVFHGVRKRSWGRYVSEIRLPGQKTRIWLGSFESAEMAARAYDSAAFFLKGNSASLNFPEDVEFLPRPLSSSRRDIQSAASKAAHQRNHQQQQEQLRGVTPSSSSVETKMNENNNIINTNSSDDIITSENNNVNDFSIEMMEWWKEEECVSTTSFWDVKDAPLMSPTRVGSIFGDMMTWNEVFNFNDDNSLVYVP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01045 222 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Mepo2g01045 222 MobiDBLite consensus disorder prediction 1 29 - -
Mepo2g01045 222 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 150 - -
Mepo2g01045 222 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Mepo2g01045 222 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 MobiDBLite consensus disorder prediction 96 150 - -
Mepo2g01045 222 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Mepo2g01045 222 MobiDBLite consensus disorder prediction 1 16 - -
Mepo2g01045 222 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Mepo2g01045 222 MobiDBLite consensus disorder prediction 98 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01045 Mepo-Chr2 13700551 13701424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01045 29 104 AP2-EREBP Transcription Factor Family AT1G01250 67.105 8.59e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g01045 AP2 7.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01045 K09286 - gmx:100783790 173.711