Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01040 ATGGAGAGGTCGTTTGTACATCAAGTACATAACAATGTCAACGCAACTCCGATGGAGGAAATGTTGGTGTCGGAGAAAGGAAATAATACAAACATTGCCGAGACTAACATGTTCTTGTCTAACACTCTCACCAGAGATCTCCAATGTTTCAGCTGCTTTGAAATATATGAGAGTAGTGTTGAGGATCTTGATGGAAACAAACGCACGAACAAGAAACAATCTTCTGACCAAGAGTTTGAAAATTACAATCTTGCCCTTCGAGTAAGCTGTCTGAAGGGTTATCCAGTTCGAGTTTTCAGATCTAGCAAGGATAAGAGATCCTCATATGTCCCTCGAAGTGGATGCCGTTATGATGGAATATATAGAATTGAAAAATGTTGCCAAGTAGCAGGACAATAG 399 0.401 MERSFVHQVHNNVNATPMEEMLVSEKGNNTNIAETNMFLSNTLTRDLQCFSCFEIYESSVEDLDGNKRTNKKQSSDQEFENYNLALRVSCLKGYPVRVFRSSKDKRSSYVPRSGCRYDGIYRIEKCCQVAGQ 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01040 132 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 59 131 IPR045134 -
Mepo2g01040 132 SUPERFAMILY PUA domain-like 54 131 IPR015947 -
Mepo2g01040 132 Gene3D - 26 132 IPR036987 -
Mepo2g01040 132 ProSiteProfiles YDG domain profile. 1 132 IPR003105 -
Mepo2g01040 132 Pfam SAD/SRA domain 55 131 IPR003105 -
Mepo2g01040 132 SMART G9a_1 22 132 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01040 Mepo-Chr2 13616854 13617823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01040 58 131 C2H2 Transcription Factor Family AT5G39550 64.865 4.60e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01040 K10638 - mof:131146264 114.005