Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01039 ATGGAGAGATCGTTTGTCCATCAAGTAAATAACAATGTCAACGCAGATATGATGGACGCAATGTTGGTGTCGGAGAAAGAAAATCATACTAACATTGTTGAGGCTAACATGTTCTTGTCTAACACTCTCACCAGAGATCTCCAATGTTTCAGCTGCTTTGAAATATATGAGAGATCTGTCACGACATCGTCTTCTACTTTTGGTGCTGAGGATCTTGATGGAAACAAACGCACGAACAAGAAACAATCTTCTCACCAAGAGTTTGAAAACTACAATATTTCCCTTCGAGTAAGCTGTCTAAAGGGTTATCCAGTTCGAGTTTTCAGATCTAGCAAGGATAAGAGATCCTCATATGCCCCTCGAAGTGGATACCGTTATGATGGAATATAA 390 0.3974 MERSFVHQVNNNVNADMMDAMLVSEKENHTNIVEANMFLSNTLTRDLQCFSCFEIYERSVTTSSSTFGAEDLDGNKRTNKKQSSHQEFENYNISLRVSCLKGYPVRVFRSSKDKRSSYAPRSGYRYDGI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01039 129 ProSiteProfiles YDG domain profile. 1 129 IPR003105 -
Mepo2g01039 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 68 129 IPR045134 -
Mepo2g01039 129 Pfam SAD/SRA domain 74 129 IPR003105 -
Mepo2g01039 129 MobiDBLite consensus disorder prediction 65 86 - -
Mepo2g01039 129 SUPERFAMILY PUA domain-like 68 129 IPR015947 -
Mepo2g01039 129 Gene3D - 55 129 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01039 Mepo-Chr2 13594804 13596532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01039 68 129 C2H2 Transcription Factor Family AT5G39550 67.742 7.15e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01039 K10638 - mof:131146264 97.4413