Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01038 ATGTTGGCGTCGAAGAAAGGAAATAATACTAACAGTGCTGAGACTAACATGTCTTTGTCTAACACTCTCACCAGAGATCTCCAATGTTTCAGTTGCTATGGATTATATGAGAGGCCTGTCACGACTCCTTGTGGGCACACTTGTTGTTTTGAGTGTTTTCGTAAGTGGGTGCTGAAAGGGAATAGGACTTGCGCCATATGTCGTCATAACATTCCAGAGAAAATTTGTGTCAATGTTGCTCTAGAAACCGTTGTTCGTGCTGTTAAGGATGAATATGAGAAAAATAGGGGTGTGCTTGTTGGTGATACATGGTCATATAGGGCTATGTGTAGGCAATGGGATGTACCTAATACTAATGGACATTTAAATCATGGTGCACAATCAATTGTTCCTGGTGGTGATGCTGATAATTATGGTGAATGGTTTCTGTACTCAAGAAGTGATGCTGAGGATCTTGATGGAAACAAATGCACAAACAAGAACCAATCTTCTGATCAAGAGTTTGAAAATTACAATATTGCGCTTCGAGTAAGCTGTCTGAAGGGTTATCCAGTTCGAGTTTTCAGTGATGTTCGTGGGGACATACCAAGACCCTTGCCAGTCGTTCGTGAACTAGAAAAGGCTATTGTCGTTTATGAAAGGACTGAAACTCCATTTTGGGGTTATGATGTGAGTGATCTCCTTTTCCGTTTTCAAATATTTTCATTTTCATCTCCATATTATAGAGTACATTACTCAAGTTAA 744 0.3978 MLASKKGNNTNSAETNMSLSNTLTRDLQCFSCYGLYERPVTTPCGHTCCFECFRKWVLKGNRTCAICRHNIPEKICVNVALETVVRAVKDEYEKNRGVLVGDTWSYRAMCRQWDVPNTNGHLNHGAQSIVPGGDADNYGEWFLYSRSDAEDLDGNKCTNKNQSSDQEFENYNIALRVSCLKGYPVRVFSDVRGDIPRPLPVVRELEKAIVVYERTETPFWGYDVSDLLFRFQIFSFSSPYYRVHYSS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01038 247 SMART ring_2 29 67 IPR001841 -
Mepo2g01038 247 ProSiteProfiles Zinc finger RING-type profile. 29 68 IPR001841 -
Mepo2g01038 247 Pfam SAD/SRA domain 94 190 IPR003105 -
Mepo2g01038 247 SUPERFAMILY PUA domain-like 95 191 IPR015947 -
Mepo2g01038 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 15 78 IPR045134 -
Mepo2g01038 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 91 IPR013083 -
Mepo2g01038 247 Gene3D - 92 202 IPR036987 -
Mepo2g01038 247 SMART G9a_1 88 218 IPR003105 -
Mepo2g01038 247 SUPERFAMILY RING/U-box 22 87 - -
Mepo2g01038 247 Pfam Zinc finger, C3HC4 type (RING finger) 26 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01038 Mepo-Chr2 13574011 13576237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01038 26 188 C2H2 Transcription Factor Family AT5G39550 34.746 3.53e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01038 K10638 - osa:9266770 150.984