Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01033 ATGGCTAAGATTTCCAATTTCTTTCATTTTTTCAACTTCATAGCAATTTTGTTACTCACATCACACTATATTATCCCTCCATGTATGTCCCTAACAAATGAAACACAAGCCCTTCTTGATTTCAAGAACCATTTAAATGACTCATTGAATTCTCTAGCTTCGTGGAATGAATCAAAATCACCATGCAACTTTCTTGGAATTACATGTGATCCAAGAAATTTGAAAGTCAGAGAAATCTCATTGGATGGTGACTCCCTATCCGGCGAAATTTTTCCATCAATCACAATTCTTCATAGCCTAGAAGTTCTTTCATTACCATCCAATTCCATTTCCGGAAAAATTCCATCAGAAGTAACAAAATTTATAAACCTCAGAGTCTTGAATCTATCAGGAAATGAACTTATTGGAGCAATTCCAGATTTGTCCGGTTTGAAAAACCTTCGAGTTCTTGATCTTTCGGCTAACTACTTTTCCGGTAGATTCCCTAGCTGGATAGGGAACCTAACCGGACTAGTTTCGCTTGGTCTCGGAGAAAATCTTTACACTGAGAGTGTGATACCAGAGAGTCTTGGAAATTTGAAGAATTTGACTTGGCTTTATCTTGGTGGTTCTCATTTGAAAGGAGAGATTCCAGAATCAATATATGAAATGGAAGCATTGGAGACTTTGGATTTGTCAAGAAACAAGTTATCTGGCAAAATCTCTAGATCGATTTCGAAGTTGAAAAATGTTTCCAAAATTGAGTTGTTTTCGAACAATTTGACGGGCCAAATACCAGCAGAACTTGCAAATTTAACCAATTTGCAAGAGATTGATCTTTCTGCAAACAAATTGTTTGGTAAGTTGCCTAAGCAGATTGGTGAAATGAAGAATCTGGTTGTTTTTCAGCTGTATGATAACAGCTTTTCTGGTCAAATTCCTGCTGGATTTGGTAACATGGAAAATCTCACAGGTTTTTCGGTTTACAGAAACGGTTTCAACGGTACAATTCCGGAGAATTTTGGCCGATTTTCTCCGCTCAAAAGTATCGACATATCAGAGAATCAATTTTCAGGTTTTTTCCCAAAGTACTTATGTGAGAAAAGAAAGTTGACACTTTTGCTTGCATTGCAAAACAATTTCTCTGGAAATTTTTCCGAGTCTTATGCTTCATGCAAGTCACTAGAAAGATTAAGAATCAGTAACAATTCTTTGTCTGGAAAAATTCCGAAAGGTGTTTGGTCACTTCCTAATGCAAAGATAATTGATTTAGGTTTTAATAATTTCAGTGGTGAAGTATCTTCAGAAATTGGTTATTCAACAAATTTAAGTGAAATTGTTTTGATGAATAACAAGTTTTCAGGTAAAGTTCCTTCAGAAATCGGAAAATTGGTGAATTTGGAGAAACTTTACTTGAGTAACAACAATTTCTCTGGTGAAATTCCACATGAAATTGGATTATTAAAACAGTTATCTACTTTGCATTTGGAAGAGAATTCATTAACTGGTTTACTACCGAAAGAATTAGGTCATTGTTCGAGGTTGGTGGATTTGAATCTTGCTTTGAATTCTCTATCAGGAAATATTCCGAACTCGGTTTCACTTATGAGTTCATTGAATTCTTTGAATTTATCAAGAAACAAATTAACAGGTACAATTCCTGATAATTTGGAGAAAATGAAACTAAGTTCAGTGGATTTTTCTGAAAATTCTCTTTCTGGTGGAATTCCATTTGGGATTTTGATTATTGGTGGAGAGAAGGCTTTTGTTGGAAACAAAGAACTATGTGTTGAGCAAATTCCGAAAACTTCGATGAATTCTGATTTGAAGATTTGTGATAAAGATCATGGTCATGGAAGAGGGATCTTTGCTTATAAATATTTGCTGCTCTTTTTCATTGCTGTTATCTTCGCTGCCGCGATCGTGATCCATAGATGCATGAAGAATCGAAAAGAAAAAAATTTACAAAAAGGCGAAAGGGAAGCAAGTCAAAAATGGAAACAAGCATCTTTTCATCAAGTGGATATTGATGCAGATGAAGTAAGTCATTTGGATGAAGATAATTTAATCGGCTACGGTGGCACCGGAAAGGTTTATCGAGTCAAGTTGAAGAAAAACGGCATAGTGGTGGCCGTAAAGCAACTAGAGAAAGGCTACGGTGTGAAGATTTTAGCTGCTGAGATGGAGATTTTAGCGAAAATTAGACACAAAAATATACTCAAACTTTATGCTTGTTTTCTTAAAGGAGGGTCCAATCTTTTGGTTTTTGAGTATATGCCAAATGGTAATCTTTTCCAAGCTCTTCATAGAGAGGTAAAAGATGAGAAGGTAACATTTGATTGGAATCAGAGGTACAAAATTGCTTTGGGAGGTGCAAAAGGAATTTGCTATTTGCACCATGATTGTTCTCCACCTGTTTTTCATAGGGATATAAAATCAAGCAACATTTTGCTTGATGCAAATTATGAAGCAAAAATTGCTGATTTTGGTGTTGCAAGATTTGCTGAAAAATCTCAGATGGGTTATAGCGTTTTTGCTGGCACACATGGTTATATTGCTCCAGAACTAGCTTATACAACTGAAATAACCGAAAAGAGCGACGTATACAGCTTTGGTGTGGTGCTATTAGAGTTAGTATCTGGAAGAGAACCTGTTGAAGAAGAGTATGGAGAAGCAAAAGACATTGTTCATTGGGTTATGAGTAATCTCAACGATCGCGAAAGTGTACTCAACATTCTTGATGGTAGAGTTGCATCAACACATTGTGTTGAAGATATGATAAAAGTGTTGAAGATTGGTATCAAGTGTACTACTAAGCTTCCAACTTTGCGTCCAACTATGAGAGATGTTGTTAAGATGCTTGTTGATTCTGAACCTTGCAAGATAAAATCGAAACCATGTGGTTTTGAGAAACATGCAGGCTCTTTTGACTAG 2913 0.3584 MAKISNFFHFFNFIAILLLTSHYIIPPCMSLTNETQALLDFKNHLNDSLNSLASWNESKSPCNFLGITCDPRNLKVREISLDGDSLSGEIFPSITILHSLEVLSLPSNSISGKIPSEVTKFINLRVLNLSGNELIGAIPDLSGLKNLRVLDLSANYFSGRFPSWIGNLTGLVSLGLGENLYTESVIPESLGNLKNLTWLYLGGSHLKGEIPESIYEMEALETLDLSRNKLSGKISRSISKLKNVSKIELFSNNLTGQIPAELANLTNLQEIDLSANKLFGKLPKQIGEMKNLVVFQLYDNSFSGQIPAGFGNMENLTGFSVYRNGFNGTIPENFGRFSPLKSIDISENQFSGFFPKYLCEKRKLTLLLALQNNFSGNFSESYASCKSLERLRISNNSLSGKIPKGVWSLPNAKIIDLGFNNFSGEVSSEIGYSTNLSEIVLMNNKFSGKVPSEIGKLVNLEKLYLSNNNFSGEIPHEIGLLKQLSTLHLEENSLTGLLPKELGHCSRLVDLNLALNSLSGNIPNSVSLMSSLNSLNLSRNKLTGTIPDNLEKMKLSSVDFSENSLSGGIPFGILIIGGEKAFVGNKELCVEQIPKTSMNSDLKICDKDHGHGRGIFAYKYLLLFFIAVIFAAAIVIHRCMKNRKEKNLQKGEREASQKWKQASFHQVDIDADEVSHLDEDNLIGYGGTGKVYRVKLKKNGIVVAVKQLEKGYGVKILAAEMEILAKIRHKNILKLYACFLKGGSNLLVFEYMPNGNLFQALHREVKDEKVTFDWNQRYKIALGGAKGICYLHHDCSPPVFHRDIKSSNILLDANYEAKIADFGVARFAEKSQMGYSVFAGTHGYIAPELAYTTEITEKSDVYSFGVVLLELVSGREPVEEEYGEAKDIVHWVMSNLNDRESVLNILDGRVASTHCVEDMIKVLKIGIKCTTKLPTLRPTMRDVVKMLVDSEPCKIKSKPCGFEKHAGSFD 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01033 970 SUPERFAMILY Protein kinase-like (PK-like) 673 947 IPR011009 -
Mepo2g01033 970 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Mepo2g01033 970 Pfam Leucine Rich repeats (2 copies) 99 142 IPR025875 -
Mepo2g01033 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Mepo2g01033 970 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Mepo2g01033 970 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Mepo2g01033 970 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Mepo2g01033 970 Pfam Protein kinase domain 679 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01033 970 Gene3D Transferase(Phosphotransferase) domain 1 752 958 - -
Mepo2g01033 970 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Mepo2g01033 970 SMART LRR_sd22_2 144 170 - -
Mepo2g01033 970 SMART LRR_sd22_2 217 246 - -
Mepo2g01033 970 SMART LRR_sd22_2 265 291 - -
Mepo2g01033 970 SMART LRR_sd22_2 97 126 - -
Mepo2g01033 970 ProSiteProfiles Leucine-rich repeat profile. 459 481 IPR001611 GO:0005515
Mepo2g01033 970 SMART serkin_6 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01033 970 SMART LRR_typ_2 97 121 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 265 289 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 457 480 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 481 504 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 217 241 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 529 553 IPR003591 -
Mepo2g01033 970 SMART LRR_typ_2 144 168 IPR003591 -
Mepo2g01033 970 FunFam LRR receptor-like serine/threonine-protein kinase 215 290 - -
Mepo2g01033 970 SUPERFAMILY RNI-like 248 567 - -
Mepo2g01033 970 CDD STKc_IRAK 683 947 - -
Mepo2g01033 970 Pfam Leucine Rich Repeat 459 478 IPR001611 GO:0005515
Mepo2g01033 970 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Mepo2g01033 970 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 218 947 - -
Mepo2g01033 970 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Mepo2g01033 970 ProSiteProfiles Protein kinase domain profile. 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01033 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 752 963 - -
Mepo2g01033 970 Gene3D Ribonuclease Inhibitor 241 315 IPR032675 -
Mepo2g01033 970 Gene3D Ribonuclease Inhibitor 185 240 IPR032675 -
Mepo2g01033 970 PRINTS Leucine-rich repeat signature 220 233 - -
Mepo2g01033 970 PRINTS Leucine-rich repeat signature 265 278 - -
Mepo2g01033 970 SUPERFAMILY L domain-like 58 316 - -
Mepo2g01033 970 Gene3D Ribonuclease Inhibitor 316 600 IPR032675 -
Mepo2g01033 970 Gene3D Phosphorylase Kinase; domain 1 636 751 - -
Mepo2g01033 970 FunFam Receptor-like protein kinase HSL1 291 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01033 Mepo-Chr2 13488142 13492913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01033 23 953 Receptor kinase-like Gene Family AT1G72180 55.143 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo2g01033 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01033 - - gmx:100789704 1377.46