Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01032 ATGGTTTGTTGGAGATTTTCTCATTCTTCAAATTCAATTACTATTGTTTCCTTTAAACGACTCTATCATGGACCCGTTATCGAAGACATCGATAGCGGGCATTCCCATGTCTGCGGACTCGTTAAAGGGAACAATGGTTTTCGCCTCGAGTGTTGGCAATGGAGAGACTTCAATTCAAGCTCCGTGACGAACAAGAACATGTCAAAAATCGCGGTGGGAGAGAATTTTGTATGTGGGCTATTAGAAAATGGAAAAGGGAATGGTGTTACTTGCATAGGAAGTAACAATAGAGTTGTTGGAAATGAACCAAAGAATGGTGGGAATTATTCTGTTATTGAAGCTGGTTCAAATCATGTTTGTGCTATCTCAAATAATGGTGGTTTGGATTGTTGGGGTCATATGGTTGGTGAGAAACCAAAAGGGAGATTCATTTCATTGGCTTTGGGGGAAAATAGAAGTTGTGCACTTGGGTATGATGGAATTGTTACTTGTTGGGGTTTGAATAATTTCACCATGCCATTGACATTAAAAAACACTTTTTTTGAGTCAATTGTGGCTAAAAAAAGTGTTTTTTGTGGTGTTTTGTCTTCTAACTATTCTTTGTTTTGTTGGGGCAATGAAGTTTTTGAGTCAAAAAAAGATGCATTCAAGGTCTTTGATAATGTGCTTCCTGGACCTTGTAAGAATCAATGTCCATGTGGACCTTTATCAGATTCTGCTAAGCTTTGTGTCTCACCAGCCATCATTTGCAAACCTTGTTCACCATCATTTGAAATTCCATCATCACCGCCTTCGAATCCACCATCTCAAACACCCGAAAATCCATCGAAAAGTGGTACATGGAGCAACAAAAATGTGGCATTTCTAGTAGTTGGATGTGTTGGTTGCACTTCCTTGTTACTAGTCCTGTCTTTTTTCCTTTACAAATACTGCAAAGGAACGGCGTGCAAATCTAGTAGAGTTCATGACTCTGGAAGACTAGATGATCTCGATCGTGAAAATGAATCACAACCTCGGGCTAACCATGCGATTCTCGAGAAGAGGTTAAGCCATGTAATCAGCATGGGAAATGGAGGTACCCTTTTGGAGGAAATTTCCCTTCAGACATTACTTGAAGCCACCAACAATTTCTCTGAAGAGAACAAAATTGGCGTCGGTAGCTTTGGTTCGGTGTATCGTGCAAAACTTGAAGATGGAAAAGAAGTTGCTATAAAAAGAGCTGAAATTTCATCAACTTCAACTTCTCATGCAAATTTTGGTGTCACCAAAAGACAAGAAGACACAGACAGTGCATTTGTGAATGAACTTGAATCTTTATCAAGACTCCATCACAAAAACTTGGTCAAATTACTCGGTTTCTATGAAGACAAAAATGAAAGAATCTTAGTCTACGAATACATGAACAACGGAAGCTTAAACGACCATCTTCATAAGTTTCAAACTTCAACAATTATGTCATGGAGCGGTCGTATAAAAGTCGCTTTAGACGCGGCTAGAGGTATAGAATATTTACACAAATACGCTCAACCGCCGATTATCCACCGTGACATTAAAACGTCAAACATTTTATTAGATTCAAAATGGGTCGCTAAAGTGTCTGATTTCGGATTATCATTAATGGGTCCGGAAGACGAAGAGTCGCATCTTTCGCTACTAGCGGCCGGAACCGTTGGTTACATGGATCCTGAATACTATAGGCTTCAATATTTAACATCAAAAAGTGATGTCTATAGTTTTGGTGTTGTTTTGTTAGAACTTTTAAGTGGATATAAAGCCATACATAAAAATGAAAATGGTGTACCAAGAAATGTGGTTGATTTTGTGGTACCCTACATTGTTCAAGATGAGATTCATAGAATTTTGGACACAAAATTGCCACCACCAACACCATTTGAGATTGAGGCTGTGACTTTTGTGGGCTATTTGGCTTGTGATTGTGTTCGTTTAGAAGGTAGAGATAGACCAAATATGAGTCATGTTGTGAATAGTTTAGAAAAAGCTCTTGAGGCATGTTTGGCACAACCAATATTTTGTGAGTCAACTAGGACCACTAGTACCAATGTTTCTTATGAGTGA 2076 0.3868 MVCWRFSHSSNSITIVSFKRLYHGPVIEDIDSGHSHVCGLVKGNNGFRLECWQWRDFNSSSVTNKNMSKIAVGENFVCGLLENGKGNGVTCIGSNNRVVGNEPKNGGNYSVIEAGSNHVCAISNNGGLDCWGHMVGEKPKGRFISLALGENRSCALGYDGIVTCWGLNNFTMPLTLKNTFFESIVAKKSVFCGVLSSNYSLFCWGNEVFESKKDAFKVFDNVLPGPCKNQCPCGPLSDSAKLCVSPAIICKPCSPSFEIPSSPPSNPPSQTPENPSKSGTWSNKNVAFLVVGCVGCTSLLLVLSFFLYKYCKGTACKSSRVHDSGRLDDLDRENESQPRANHAILEKRLSHVISMGNGGTLLEEISLQTLLEATNNFSEENKIGVGSFGSVYRAKLEDGKEVAIKRAEISSTSTSHANFGVTKRQEDTDSAFVNELESLSRLHHKNLVKLLGFYEDKNERILVYEYMNNGSLNDHLHKFQTSTIMSWSGRIKVALDAARGIEYLHKYAQPPIIHRDIKTSNILLDSKWVAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQYLTSKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPYIVQDEIHRILDTKLPPPTPFEIEAVTFVGYLACDCVRLEGRDRPNMSHVVNSLEKALEACLAQPIFCESTRTTSTNVSYE 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01032 691 ProSiteProfiles Protein kinase domain profile. 377 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01032 691 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 97 675 IPR044815 GO:0004674
Mepo2g01032 691 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Mepo2g01032 691 CDD STKc_IRAK 383 666 - -
Mepo2g01032 691 SUPERFAMILY RCC1/BLIP-II 18 208 IPR009091 -
Mepo2g01032 691 Gene3D Phosphorylase Kinase; domain 1 340 466 - -
Mepo2g01032 691 SUPERFAMILY Protein kinase-like (PK-like) 359 664 IPR011009 -
Mepo2g01032 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Mepo2g01032 691 Pfam Protein kinase domain 378 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01032 691 Gene3D Transferase(Phosphotransferase) domain 1 467 676 - -
Mepo2g01032 691 FunFam Serine/threonine-protein kinase-like protein CCR4 467 682 - -
Mepo2g01032 691 Gene3D - 8 222 IPR009091 -
Mepo2g01032 691 SMART serkin_6 377 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01032 Mepo-Chr2 13482233 13484905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01032 1 690 Receptor kinase-like Gene Family AT5G47850 50.429 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mepo2g01032 Pkinase 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01032 - - pvu:PHAVU_011G003100g 906.746