Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01029 ATGGCCCAACAGTCATCCAGGCTTCAGCGCTTGCTTACTCTCTTGGACACTGGCTCAACCCAAGCAACAAGGTTGACTGCAGCTCGGCAGATCGGGGAGATTGCAAAATCGCACCCTCAAGATTTGACTAGTCTTCTTAAGAAGGTTTCTCAATATCTGCGAAGTAAAAAATGGGATACAAGAGTTGCAGCTGCTCATGCAATTGGCTCTATTGCTGATAATGTTAAGCACATAAGCTTGAATGAACTTATTGCTTCTGTTGTAACAAAAATGTCCGAGAGTGGGATATCTTGCAGTGTTGATGATCTGTGTGCATGGCCTTATTTACAAGCAAAAATTACAGGAAGCTCATTTAGAAGCTTTGATATGAATAAGGTGCTTGAATTTGGAGCTTTATTAGCATCAGGAGGACAGGAATATGATATTGCAAGTGACAATATAAAGAACCCGAAGGAGCGATTGGTTCGCCAGAAGCAAAATCTTCGACGTCGGTTAGGTTTGGATGTGTGCGAACAATTTATGGATATCAATGATGTAATAAGAGATGAAGATCTTATGGCACACAAATCAGATTCATATCTGAATGGCATGGATCATAAAGTTTTTACATCTTGTTCTGTACATAACATCCAGAAAATGGTTGCAAATATGGTTCCTAGTGTCAAATCAAAGTGGCCGAGTGCTAGAGAACGGAATCTTTTAAAACGCAAAGCAAAAATTAACTCTAAAGACCAAACAAAGAGCTGGTGCGAGGATGGAACAGAGCCTTCAGGTACTCAAAATTTGACCTCAAAAGGCACATGTCCTGATTCAGGAAATTATAGTAAGGCATCCGAACAAATTAATCACGAGGAAGATGGGTTTGAACATGATGGAGATGGACAATGGCCTTTCAGTACTTTTGTTGAGCAACTTATTATTGATATGTTTGATCCAGTTTGGGAGGTTCGGCATGGTAGCGTGATGGCATTGAGGGAGATTTTAACACACCAAGGTGCTTCGGCTGGAGTGTTTAAACATGAATCACGCTTGGGTGGGACATCGTTTGTGGAGTTAGAAGACAAAAATATATCAAATACGTTGAAGAGAGAAAGGGACATTGATTTAAATATGCAAGTTTCAGCAGATGAGTCTGTCTTGAACTTGAAGAGACCAAAACTTGAAGACGTATCATCAACAACTTCTATGGATAGCGTGATGACTTGCAGCAACGATGGTGATATTGAAAACAGCATTAGTTCTGAAATCCAGGGGTGCAATTTACCTCTGGATTATGGGAATGGGAAATTTGACGGTAGTTCTGTTGATATGAATCTGAAAACTCACTCTGACGGTTTACATGATGCATGCAAGGACTCTGCTAATATTACAGAGCAGGAGGGTTATTCTGATGACAAAATGATTACTGGAAACCCTAATGTGCTGAGAAATCTTCCTCAGAATTGTGAGCTGATGAATTTGGTTAAAGTGGCTAGAAGTTCCTGGCTTCGAAACTGTGAATTTCTTCACGACTGTGTCATACGCTTTTTGTGTGTATTGTCACTTGACCGCTTTGGAGATTATGTATCTGATCAGGTTGTTGCTCCAGTGCGTGAAACTTGTGCACAGGCATTAGGTGCTGCATTTAAGTATATGCATGCTGCACTAGTAAATGAAACATTGAACATATTGTTGAAAATGCAGTGTAGTCCAGAATGGGAGATTCGTCATGGCAGTCTTCTGGGTATCAAATATTTGGTTGCTGTGCGGCAGGAGATGCTTTCTGATTTGCTTGGACGTGTTCTTCCTGCATGTAAATCTGGCTTGGAGGACCCAGATGATGATGTCCGAGCTGTTGCCGCTGATGCTTTAATACCAGCTGCAGCAGCAATTGTTGCTTTGCAGGGTCAAACACTGCATTCAATTGTGATGCTGTTGTGGGATATATTGCTTGACTTGGATGATTTAAGTCCATCCACTAGCAGTGTAATGAATCTGCTTGCAGAAATCTATTCCCATCAAGAGATGGTCCCAAAAATGTATAAAGTTTTTAAAATGGGTGACAAGGAAATAGAAAATGGTGCTAGTGGTTGTGGAAATGATGGAGAAGAAAATCCTTTTGTACTTTCAACTTTGGCACCACGTTTGTGGCCCTTTATGAGGCACAGCATCACATCTGTCCGTTATTCAGCAATGCGAACTCTGGAAAGGCTACTTGAAGCTGGATATAAGAGAAGCATGTCCGAGCTCTCCCCTGCTTCTTTTTGGCCCTCTTCTATATTTGGAGATACCCTTAGAATTGTTTTTCAGAATTTACTATTGGAAACGAATGAGGATATTTTGCAATGTTCTGAGAGAGTTTGGAGTCTCCTTGTTCAGTGTTCTGTCGTGGACCTGGAGAATGCTGCAAGCTCTTACATGACTTCCTGGATAGAACTTGCATCTACACCTTTTGGTTCTGCATTAGATGCCTCAAAGATGTTTTGGCCTGTTGCCTTTCCTCGAAAAAGTCAATTTAGAGCAGCAGCTAAAATGAGAGCTGTGAAGATTGAAAATGAATATGGCGGAGATCTTGGCCTTGAATCTATGAAATCAACTATTCCACAAGATAGAAATGGAGATGTTCCTTTGAATTCCATTAAGATAGTTGTTGGTGCTGAGGTCGACATATCAGTAACTCGTACCCGGGTAGTTACAGCAACTGCTTTGGGAACTTTTGCCTCTAAGCTTCCAGAGGGTTCTTTGAAGTATGTAATTGATCCACTATGGAGTTCATTAACCTCTCTGTCTGGTGTCCAGCGCCAGGTTGCATCTTTGGTACTTATTTCTTGGTTCAAGGAGAATAGGACCAGGAGTTTGTCTGAAAGCCTCAATGTTATTCCTGCTTGCCTCAAAGATTGGTTGCTGGACTTGTTAGCATGTTCTGACTCCGCATTCCCAACAAAAGGTTCACTTCTTCCTTATGCGGAGCTTTCAAGAACTTATTCAAAGATGCGAAGTGAGGCTGCTCAATTGCTAAATGCAGTCAAGTCTTCTGGTATGTTTAGCGAGCTATTGGCAACAACCAATATTGAGTTGGATAACTTGAGTGTAGATGATGCCATTGGTTTTGCATCAAAAATTCCAGCAGTGTGTAATGATAGTACTGCAAACGAATCTATAAAGAACACTATGGATGATATTGAATCATCAAAACAGAGGCTCTTGACAACTTCTGGTTATTTGAAATGTGTTCAGAATAATTTACATGTTACGGTTACATCTGCAGTTGCAGCTGCAGTTGTGTGGATGTCTGAGTTTCCTACACGGCTCAATCCCATCATTTTGCCTTTAATGGCTTCAATCAGACGAGAGCAGGAGGAAATACTGCAAATTAAGTCAGCTGAGGCTCTCGCTGAGCTAATATATCACTGTGTTTCACGTAGACCTTGCCCCAATGATAAATTAATTAGGAATATATGTGGTTTGACTTGCATGGATCCCTCTGAGACCCCTCAAGCTAAATCCATTTGTTCCATCGAGAGTATTGATGACCAAGGTCTTCTGTCTTTCAGAACTCCGGTGAATAAACAAAAGTCAAAGGTGCATGTGCTGACTGGTGAGGATCGATCAAAGGTGGAGGGATTTATTAGTAGACGTGGATCTGAGCAATCATTAAGGCTTCTGTGTGAGAAGTTCGGTGTTTTGCTATTTGATAAACTTCCTAAGCTGTGGGATTGCCTTACCGAGGTTCTTAAGCCAAGTTCCTCTGAATCTCTACTTGCTGCTAATGAAGAGGAAGATACTGTAGCAATTGAGTCTGTTAGTGATCCTCAGACCTTGATTAACAATATTCAGGTTGTGCGGTCTATTGCCCCCTTGTTAAATGAGGAGCTGAAGCCAAAACTTTTGACACTTCTCCCATCTGTTTTTAAATGTGTTAAGCATTCACATGTCGCTGTTAGACTAGCTGCTTCACGCTGCATCACCTCCATGGCCCAGTCAATGATTGTGAAAGTCATGGGAGCCGTGGTTGAAAATGCTATCCCTATGTTGGAAGATGCATCATCAGTTCATGCTCGGCAAGGAGCAGGCATGTTGATTAGCTTTCTTGTTCAGGGGCTTGGTGTAGAGTTGGTCCCATACGCTCCTCTGCTGGTGGTTCCCCTTCTACGATGCATGAGTGATTGTGATCAGTCTGTCAGACAGAGTGTTACCCATAGCTTTGCTGCTCTTGTACCTTTACTTCCTTTAGCACGTGGTGTTCCACAACCAATTGGATTAGGGGAAGGTGTATCTAGAAATGCAGAAGATTTACATTTTCTGGAGCAGCTACTTGACAACTCTCATATTGAAGATTACAAGTTGTGCACTGAATTGAAAGTAACATTGAGAAGGTATCAACAGGAAGGCATAAATTGGTTAGCTTTTCTGAAACGTTTCAAACTTCATGGAATTTTATGTGATGACATGGGGCTTGGTAAGACACTTCAAGCATCAGCAATTGTGGCCTCTGAAATAGTTGAGCGTCGAACTCAAATCGAAAACGAGGATCTTCTGCCATCTTTAATTATTTGCCCGTCAACACTAGTTGGACACTGGGCCTTTGAGATAGAAAAGTTTATTGATGTTTCAGTCATATCTAGTCTTCAGTATGTTGGTTCTGCTCAGGATCGAATGCTTCTTCGAGATAGTTTTTGCAAGCATAATGTAATTATAACATCATATGATGTTGTCCGGAAAGATATTGATTATTTGGGACAGCTGCCGTGGAATTACTGCATTTTAGATGAAGGACATATAATAAAAAATGCCAAGTCTAAAGTTACTCTTGCTGTAAAGCAGTTGAAAGCCCAACACCGCTTGATATTGAGTGGGACACCAATACAGAATAACATAATGGACTTATGGTCCCTTTTTGATTTTTTGATGCCTGGATTTCTTGGAACAGATAGACAGTTCCAAAGCACATATGGAAAACCACTTTTAGCTTCAAGAGATCCAAAGTGCTCTGCTAAGGATGCCGAAGCTGGAGCACTTGCTATGGAAGCATTGCATAAGCAGGTCATGCCTTTCCTCCTTCGGAGGACGAAGGATGAAGTCTTGTCCGATCTGCCAGAGAAAATAATTCAAGACAGATACTGTGATTTGAGCACTGTACAACTTAAACTTTACGAACAGTTTTCTGGTTCTCGTGCAAAACAAGAGGTGTCATCTATTGTAACAACGAATGAGTCAGCTGCAGCAGAAGGAAGTAGCAGTTCTACTAAAGCGTCTTCACATGTTTTCCAGGCACTCCAATACTTGCTTAAACTCTGTAGTCATCCGTTGCTTGTACTTGGTGGGAAGATTCCAGATTCACTCTCTACCATCCTTTTGGAACTGTTTCCTGCTGGTTCTGATGTCATTTCAGAACTTCACAAACTCCATCACTCTCCAAAACTAGTTGCTCTTCATGAGATTCTCGAAGAGTGTGGAATTGGAGTTGATGCTTCAGGTACTGAGAATGCTGTTGGTATTGGGCAGCATAGGGTCTTGATATTTGCTCAACATAAGGCGTTCTTGGATATAATTGAAAAAGATTTGTTTCAGACTCACATGAAAAGTGTCACATATTTGCGACTGGATGGATCAGTTGAGACCGAGAAGCGATTTGAAATTGTAAAAGCTTTCAATTCAGATCCTACCATTGATGTCTTATTGCTTACGACTCATGTGGGCGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTTGTTTTTGTGGAGCATGACTGGAATCCTATGCGTGATCTTCAGGCTATGGATAGAGCGCACAGGTTAGGTCAGAAAAAAGTAGTTAATGTTCACCGTCTGATAATGCGTGGTACTCTGGAAGAGAAAGTTATGAGTCTACAACGGTTTAAAGTGTCAGTGGCTAATGCTGTCATTAATGCGGAAAATGCTAGTTTGAAAACAATGAATACAGATCAATTGCTTGATTTATTTGCATCAGCAGAAATCCCCAAGGGGTCTTCTGTTGCGAAGAGTTCAGAGGACAACAGTGATGGAGACCCTAAATTATTAGGCAGTGGAAAGGGAATGAAAGCAATACTTGGAGGATTGGAGGATCTATGGGACCAATCACAGTATACAGAGGAGTACAATTTGAGTCAATTTTTGGCGAAGCTTAATGGTTAA 6138 0.4132 MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGEIAKSHPQDLTSLLKKVSQYLRSKKWDTRVAAAHAIGSIADNVKHISLNELIASVVTKMSESGISCSVDDLCAWPYLQAKITGSSFRSFDMNKVLEFGALLASGGQEYDIASDNIKNPKERLVRQKQNLRRRLGLDVCEQFMDINDVIRDEDLMAHKSDSYLNGMDHKVFTSCSVHNIQKMVANMVPSVKSKWPSARERNLLKRKAKINSKDQTKSWCEDGTEPSGTQNLTSKGTCPDSGNYSKASEQINHEEDGFEHDGDGQWPFSTFVEQLIIDMFDPVWEVRHGSVMALREILTHQGASAGVFKHESRLGGTSFVELEDKNISNTLKRERDIDLNMQVSADESVLNLKRPKLEDVSSTTSMDSVMTCSNDGDIENSISSEIQGCNLPLDYGNGKFDGSSVDMNLKTHSDGLHDACKDSANITEQEGYSDDKMITGNPNVLRNLPQNCELMNLVKVARSSWLRNCEFLHDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHAALVNETLNILLKMQCSPEWEIRHGSLLGIKYLVAVRQEMLSDLLGRVLPACKSGLEDPDDDVRAVAADALIPAAAAIVALQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSHQEMVPKMYKVFKMGDKEIENGASGCGNDGEENPFVLSTLAPRLWPFMRHSITSVRYSAMRTLERLLEAGYKRSMSELSPASFWPSSIFGDTLRIVFQNLLLETNEDILQCSERVWSLLVQCSVVDLENAASSYMTSWIELASTPFGSALDASKMFWPVAFPRKSQFRAAAKMRAVKIENEYGGDLGLESMKSTIPQDRNGDVPLNSIKIVVGAEVDISVTRTRVVTATALGTFASKLPEGSLKYVIDPLWSSLTSLSGVQRQVASLVLISWFKENRTRSLSESLNVIPACLKDWLLDLLACSDSAFPTKGSLLPYAELSRTYSKMRSEAAQLLNAVKSSGMFSELLATTNIELDNLSVDDAIGFASKIPAVCNDSTANESIKNTMDDIESSKQRLLTTSGYLKCVQNNLHVTVTSAVAAAVVWMSEFPTRLNPIILPLMASIRREQEEILQIKSAEALAELIYHCVSRRPCPNDKLIRNICGLTCMDPSETPQAKSICSIESIDDQGLLSFRTPVNKQKSKVHVLTGEDRSKVEGFISRRGSEQSLRLLCEKFGVLLFDKLPKLWDCLTEVLKPSSSESLLAANEEEDTVAIESVSDPQTLINNIQVVRSIAPLLNEELKPKLLTLLPSVFKCVKHSHVAVRLAASRCITSMAQSMIVKVMGAVVENAIPMLEDASSVHARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGVPQPIGLGEGVSRNAEDLHFLEQLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASEIVERRTQIENEDLLPSLIICPSTLVGHWAFEIEKFIDVSVISSLQYVGSAQDRMLLRDSFCKHNVIITSYDVVRKDIDYLGQLPWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTDRQFQSTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSTVQLKLYEQFSGSRAKQEVSSIVTTNESAAAEGSSSSTKASSHVFQALQYLLKLCSHPLLVLGGKIPDSLSTILLELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGTENAVGIGQHRVLIFAQHKAFLDIIEKDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLKTMNTDQLLDLFASAEIPKGSSVAKSSEDNSDGDPKLLGSGKGMKAILGGLEDLWDQSQYTEEYNLSQFLAKLNG 2045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01029 2045 SMART ultradead3 1446 1642 IPR014001 -
Mepo2g01029 2045 Gene3D - 1422 1681 IPR038718 -
Mepo2g01029 2045 Gene3D - 1692 2004 IPR027417 -
Mepo2g01029 2045 FunFam B-TFIID TATA-box-binding protein-associated factor 1 1420 1681 - -
Mepo2g01029 2045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1683 1984 IPR027417 -
Mepo2g01029 2045 Gene3D - 508 691 IPR011989 -
Mepo2g01029 2045 FunFam TATA-binding protein-associated factor 172 1692 2007 - -
Mepo2g01029 2045 SMART helicmild6 1842 1928 IPR001650 -
Mepo2g01029 2045 FunFam TATA-binding protein-associated factor BTAF1 506 686 - -
Mepo2g01029 2045 FunFam TATA-binding protein-associated factor BTAF1 1 96 - -
Mepo2g01029 2045 Pfam Helicase conserved C-terminal domain 1828 1928 IPR001650 -
Mepo2g01029 2045 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1462 1632 IPR014001 -
Mepo2g01029 2045 Gene3D - 882 1408 IPR011989 -
Mepo2g01029 2045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1430 1682 IPR027417 -
Mepo2g01029 2045 Pfam SNF2-related domain 1468 1764 IPR000330 GO:0005524|GO:0140658
Mepo2g01029 2045 CDD SF2_C_SNF 1797 1939 - -
Mepo2g01029 2045 SUPERFAMILY ARM repeat 6 1487 IPR016024 -
Mepo2g01029 2045 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1819 1978 IPR001650 -
Mepo2g01029 2045 FunFam TATA-binding protein-associated factor BTAF1 1197 1408 - -
Mepo2g01029 2045 MobiDBLite consensus disorder prediction 251 278 - -
Mepo2g01029 2045 CDD DEXHc_Mot1 1450 1682 IPR044078 GO:0005524
Mepo2g01029 2045 Gene3D - 4 95 IPR011989 -
Mepo2g01029 2045 MobiDBLite consensus disorder prediction 244 278 - -
Mepo2g01029 2045 Pfam Domain of unknown function (DUF3535) 780 1233 IPR022707 -
Mepo2g01029 2045 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 4 2044 IPR044972 GO:0003677|GO:0016887|GO:0017025
Mepo2g01029 2045 Coils Coil 981 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01029 Mepo-Chr2 13424389 13450268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01029 1445 1983 RAD5 or RAD16-like Gene Family AT1G02670 26.711 6.48e-43 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo2g01029 DUF3535 1.2e-102 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01029 K15192 - gmx:100777977 3452.14