Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01006 ATGCAACCTGTTTCTGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCAGCGAGTTGGTTAGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGATAGACAACAAGATCATAATTTAAGTTTTACTCAACTGCTTTCTAATAATAACGTTGCTGCTGGTCCTGGCCCTTCAACTCCTGAGTCTCACCCATATTTATCTGACTATTACTCTTCACCACTTACTCCCACATCTGCTAATGTTGCTAATAATCCTTTCACTCAGGGAGTTGAGGATAGTGGTATAGCAATTGACCTTAAAATGGACAAGATTTTAGAGGATTCAGTTCCTTGTAAGATTCGGGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAACATGGATAAGGTTTTACTTTTCATCATAAACCACTATAACATATTTGTTTTAGTGTTTTTTTTATTACCAGGAAATGATTTAATTCTAGTTGTTATTTACCATACATTATGCTTTGTACCTTTGAACAGTATGCAAGATGATGAATTGTCATATACAGAACCTTTCTTTTCTTTTATCACAGATGAGGTTTTGATTGAAATTTACTTGGAAAGATATTGCAATGATAATTCAATTCATCTATGA 690 0.3551 MQPVSGGGGLTRFNSTPASWLESFILKEEDEVDDRQQDHNLSFTQLLSNNNVAAGPGPSTPESHPYLSDYYSSPLTPTSANVANNPFTQGVEDSGIAIDLKMDKILEDSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKVLLFIINHYNIFVLVFFLLPGNDLILVVIYHTLCFVPLNSMQDDELSYTEPFFSFITDEVLIEIYLERYCNDNSIHL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01006 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 152 IPR036638 GO:0046983
Mepo2g01006 229 MobiDBLite consensus disorder prediction 46 70 - -
Mepo2g01006 229 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 153 - -
Mepo2g01006 229 Gene3D - 113 160 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01006 Mepo-Chr2 13096847 13100018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01006 9 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 39.409 4.07e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01006 - - lja:Lj3g3v3754390.1 157.918