Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00919 ATGATGGAACCCTGCAATTGTATTGAGCCACAATGGCCAGCAGATGATTTATTGATGAAATACCAATATATATCAGATTTCTTCATTGCCCTTGCTTATTTCTCGATCCCGCTCGAGCTTATCTACTTTGTTAAGAAATCTGCAGTATTTCCATATAGATGGGTCCTTGTTCAATTTGGTGCCTTCATAGTTCTATGTGGAGCAACACATCTAATTAATTTATGGACCTTCACAATTCATACAAGAACCGTGGCAATTGTAATGACCACCGCCAAGGTTTTAACTGCTGTGGTATCGTGTGCCACTGCCCTTATGCTTGTACATATTATTCCCGATTTATTAAGTGTTAAAACTAGGGAATTATTTTTGAAGAACAAGGCTGCGGAGCTTGATAGAGAAATGGGCTTGATTCGTACGCAGGAAGAAACCGGTCGACATGTTAGGATGTTGACTCATGAGATTAGAAGTACTCTTGATAGACATACAATACTGAAAACGACTCTTGTTGAACTCGGTAGAACTCTTGGGTTAGAGGAATGTGCATTATGGATGCCGACACGTACTGGGTTGGAGCTTCAACTTTCTTACACATTGAGACAGCAGAACCCTGTTGGATATACGGTACCTATTAATCTTCCTGTAATCAATCATGTATTTAGTAGCAACCGTGCAGTTAAAATTTCATCGAATTGCCCAGTTGCTAGATTACGACCTCATGCTGCAAAATACATGCCTGGGGCAGTAGTTGCTATTCGGGTTCCTCTCCTAAATCTTTCAAATTTTCAAATATATGATTGGCCTGAGGTTTCAAATAGAAGCTATGCTTTGATGGTTTTGATGCTTCCATCTGATAGTGCTAGACAGTGGCATGTACATGAGTTAGAGCTGGTCGAGGTAGTTGCTGATCAGGTAGCTGTTGCTCTTTCTCATGCTGCAATCTTAGAAGAGTCGATGAGGGCAAGGGATCAACTTATGGAGCAGAATGTTGCACTTGATATGGCAAGAAGAGAAGCAGAAACTGCAATTCATGCTCGCAATGACTTTTTGGCTGTTATGAATCACGAGATGAGAACTCCGATGCATGCAATTATTGCACTCTCTTCATTGATGCAGGAAACAGATCTGACTGCTGAGCAACGTCTAATGGTGGAAACAATATTGAAAAGCAGCAATTTATTAGCTACACTCGTCAACGATGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTTTTCAACTTGAAATATCAACATTTAACCTTCATTCATTGTTTAGAGAGGTCCTTAACTTGATTAAACCTGTTGCATCTGTTAAAAAGCTGTCACTCACTTTACATTTCGCATCAGATTTGCCGGTGCATGCGATTGGTGATGAAAAACGTCTCATGCAAATTCTTCTCAATGTTGTTGGTAATGCTGTTAAGTTCACAAAAGAAGGCAGCATTTCCATCGCCGTGGTTGTTGTAAAGCCTGAATCCTTCCGGGATATTAGATTTCCTGATTTCCTACCAGTACCAAGTGATAGCCACTTTTATTTGCGAGTACAGGTAAAAGATTCGGGATCAGGAATCAATCCACAAGACATCCCAAAGTTATTCACTAAGTTTGCACAAAACCAAACATTAGCAACAAAAAATCCCATTGGAAGTGGGCTTGGCCTTGCAATTTGTAAAAGGTTTGTGAATCTCATGGAAGGGCATATTTGGATTGAAAGTGAAGGTATTGGCAAAGGATGTACAGCCACTTTCATTGTAAAACTTGGAATCCCGGACCGTCCAAATGAACATAAACTACCTTACAAACCTAAAGCTCTAGTAAATCATGGATCTACAAACATTTCTGGCCTCAAGGTTCTTGTCATGGATGATAATGGGGTGAGTAGGTCAGCGACAAAGGGGCTTCTTATGCATTTAGGATGCGACGTCACAGCTGTAAGCTCAAGTGAAGAATGCCTGCGTGTTGTTTCACTGGAACACAAAGTGGTCTTTATGGATGTTTGTACAGGGTTAGATGGTTATGAATTAGCGGTTCGTATACAAGAGAAGTTCACAAAACGTCAAGATAGACCACTTATAGTTGCTCTTACCGGAAACACAAACAAGTTGACCAAAGAGAACTGTTTGAGAGCTGGTGTGAATGGCCTAGTTTTGAAACCTGTCTCCGTTGAGAAGATGAAAGGTGTTTTAACAGAACTGTTGGAGCGTCGGTTTGTGTTTGAAACAATTTAA 2226 0.4052 MMEPCNCIEPQWPADDLLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTIHTRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQNPVGYTVPINLPVINHVFSSNRAVKISSNCPVARLRPHAAKYMPGAVVAIRVPLLNLSNFQIYDWPEVSNRSYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDMARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSLMQETDLTAEQRLMVETILKSSNLLATLVNDVLDLSRLEDGSFQLEISTFNLHSLFREVLNLIKPVASVKKLSLTLHFASDLPVHAIGDEKRLMQILLNVVGNAVKFTKEGSISIAVVVVKPESFRDIRFPDFLPVPSDSHFYLRVQVKDSGSGINPQDIPKLFTKFAQNQTLATKNPIGSGLGLAICKRFVNLMEGHIWIESEGIGKGCTATFIVKLGIPDRPNEHKLPYKPKALVNHGSTNISGLKVLVMDDNGVSRSATKGLLMHLGCDVTAVSSSEECLRVVSLEHKVVFMDVCTGLDGYELAVRIQEKFTKRQDRPLIVALTGNTNKLTKENCLRAGVNGLVLKPVSVEKMKGVLTELLERRFVFETI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00919 741 PIRSF Ethylen_sen_hybr_HK 1 738 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mepo2g00919 741 Gene3D - 609 741 - -
Mepo2g00919 741 ProSiteProfiles Histidine kinase domain profile. 351 590 IPR005467 -
Mepo2g00919 741 SMART gaf_1 159 318 IPR003018 GO:0005515
Mepo2g00919 741 SMART HKATPase_4 456 588 IPR003594 -
Mepo2g00919 741 PRINTS Bacterial sensor protein C-terminal signature 512 526 IPR004358 GO:0016310|GO:0016772
Mepo2g00919 741 PRINTS Bacterial sensor protein C-terminal signature 547 565 IPR004358 GO:0016310|GO:0016772
Mepo2g00919 741 PRINTS Bacterial sensor protein C-terminal signature 530 540 IPR004358 GO:0016310|GO:0016772
Mepo2g00919 741 Gene3D - 409 591 IPR036890 -
Mepo2g00919 741 Pfam His Kinase A (phospho-acceptor) domain 345 409 IPR003661 GO:0000155|GO:0007165
Mepo2g00919 741 Gene3D - 310 408 - -
Mepo2g00919 741 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 586 IPR003594 -
Mepo2g00919 741 SUPERFAMILY GAF domain-like 159 320 - -
Mepo2g00919 741 SMART REC_2 615 728 IPR001789 GO:0000160
Mepo2g00919 741 FunFam Ethylene receptor 1 409 591 - -
Mepo2g00919 741 SUPERFAMILY CheY-like 612 734 IPR011006 -
Mepo2g00919 741 SMART HisKA_10 344 409 IPR003661 GO:0000155|GO:0007165
Mepo2g00919 741 ProSiteProfiles Response regulatory domain profile. 616 732 IPR001789 GO:0000160
Mepo2g00919 741 Pfam Response regulator receiver domain 617 725 IPR001789 GO:0000160
Mepo2g00919 741 Gene3D - 137 309 IPR029016 -
Mepo2g00919 741 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 330 410 IPR036097 GO:0000155|GO:0007165
Mepo2g00919 741 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 4 734 - -
Mepo2g00919 741 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 398 587 IPR036890 -
Mepo2g00919 741 CDD HisKA 342 405 IPR003661 GO:0000155|GO:0007165
Mepo2g00919 741 FunFam Ethylene response sensor 137 309 - -
Mepo2g00919 741 Pfam GAF domain 159 308 IPR003018 GO:0005515
Mepo2g00919 741 FunFam Ethylene receptor 609 741 - -
Mepo2g00919 741 FunFam Ethylene receptor 1 311 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00919 Mepo-Chr2 11700753 11705690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00919 2 739 Miscellaneous Gene Families AT1G66340 79.865 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo2g00919 GAF 2.1e-16 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00919 K14509 - gmx:100795340 1305.81