Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00896 ATGTCTCAATCTCAAAGTTCTTCTTCTTCTAACGATTCAGGATGTTGTTCCAGTTCCAGCAGCAATGGTAACAGATCTGATGCTTCTGGAGTAGCTGACCTGAAACTGTATAGAGCTTTTATATTCTCTGTACCAATTTTCTTCACTATAATTCTTCTTTTTCTTTTCTATGTTTTTTATTTGAGACCAAGAAGGGTTGATTGGTCTTCAATTAGGATGAGGTCTGTTTCTGTTTTACAACATCATCATAACAACAACAATGCCACCTCCACTTCTGATTTGGGGTTGAAGAAAGAATTGAGAGAGCTGTTGCCTATTATTGTGTACAATGAAAGCTTCTCTGTCAAAGATACACAATGCTCTGTATGTCTTTTGGACTACCAACCAGAAGACAGACTTCAACAAATACCTGCATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTTTCCAGCCACAGTACCTGCCCACTTTGCCGTTTGTCCCTACTAACTACTGCGAAATCTTCGAGAGAAATATCCGAAATGCAGGCTACAAGCAATGAAGAAATGGAGATGCAACAAAGAAATGAAGAAACACTAGCCATGGAATTCTCTGACTCAATATCTATTAGGCATCTAGAAACCAGTGTCATTCAAAATATCTCTGGCGAACCTGTTATCAGTGCTCACTGCGTTGAAATTGAAGATAGAAATGCGCGAAATAATCATTAG 720 0.3903 MSQSQSSSSSNDSGCCSSSSSNGNRSDASGVADLKLYRAFIFSVPIFFTIILLFLFYVFYLRPRRVDWSSIRMRSVSVLQHHHNNNNATSTSDLGLKKELRELLPIIVYNESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLSSHSTCPLCRLSLLTTAKSSREISEMQATSNEEMEMQQRNEETLAMEFSDSISIRHLETSVIQNISGEPVISAHCVEIEDRNARNNH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00896 239 SMART ring_2 120 161 IPR001841 -
Mepo2g00896 239 MobiDBLite consensus disorder prediction 1 27 - -
Mepo2g00896 239 FunFam RING-H2 finger protein ATL7 85 167 - -
Mepo2g00896 239 SUPERFAMILY RING/U-box 104 167 - -
Mepo2g00896 239 CDD RING-H2_EL5-like 119 162 - -
Mepo2g00896 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 169 IPR013083 -
Mepo2g00896 239 PANTHER RING-H2 FINGER PROTEIN ATL16 40 208 IPR044600 GO:0016567|GO:0016740
Mepo2g00896 239 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Mepo2g00896 239 Pfam Ring finger domain 119 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00896 Mepo-Chr2 11423247 11427016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00896 34 166 C3H Transcription Factor Family AT4G10150 63.235 2.69e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00896 K19039 - gmx:100794211 260.381