Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00880 ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAATGTTGTTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCAAGAACTGGAAAATCTTGTCGGTTAAGATGGGTTAATAAGCTTAGACCCAACTTGAAAACAGGGTGCAAGTTTTCATCAGAGGAAGAAAGGGTGGTGATTGAACTACAGGGGCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACAGACAATGATGTGAAGAACTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTCTCCAAGGACACCATCACCACCTTCAAAGCAGCAGAAACACAAGGGAAAAGCTATTTCTAATCAAGTAAAAGTTGAAAAGGTTCCTGAATGTGGTTCCAATCAGCTGGAGGAAAATCTTACTTACCCAACTTCTTATATGGGAAACAAAGAAGAGTTCAAGATGGTCAACCTTCCAGATTTGACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTTAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCCTCATTTGAGTCTTCATCAGCATACAACTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGATCTTGTTCAAGATCCCTTTGACCCCAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCAGAAAGTGTGTGGAACAAGAAGATTGGAACTAAGTTGCCAAGTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGCTTCTTTCAGGACATCCCAACTGAGACTTTTGAATACTTTTCTCAGTAA 891 0.3939 MEREYERGYIKKGPWSSEEDEMLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSSEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNSPRTPSPPSKQQKHKGKAISNQVKVEKVPECGSNQLEENLTYPTSYMGNKEEFKMVNLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSAYNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWNKKIGTKLPSLGLEGNSQSTSSNCFFQDIPTETFEYFSQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00880 296 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mepo2g00880 296 FunFam MYB transcription factor 12 64 - -
Mepo2g00880 296 Gene3D - 67 143 - -
Mepo2g00880 296 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Mepo2g00880 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Mepo2g00880 296 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Mepo2g00880 296 MobiDBLite consensus disorder prediction 105 137 - -
Mepo2g00880 296 FunFam Transcription factor GAMYB 67 137 - -
Mepo2g00880 296 SMART sant 65 113 IPR001005 -
Mepo2g00880 296 SMART sant 11 61 IPR001005 -
Mepo2g00880 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Mepo2g00880 296 CDD SANT 14 59 IPR001005 -
Mepo2g00880 296 CDD SANT 68 107 IPR001005 -
Mepo2g00880 296 Gene3D - 11 64 - -
Mepo2g00880 296 PANTHER TRANSCRIPTION FACTOR DUO1 4 295 - -
Mepo2g00880 296 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Mepo2g00880 296 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
Mepo2g00880 296 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00880 Mepo-Chr2 11190452 11192491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00880 4 116 MYB Transcription Factor Family AT3G60460 78.761 8.00e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g00880 Myb_DNA-binding 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00880 K09422 - gmx:121173231 424.476