Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00851 ATGAAAAGTCATCACCATCATCTTCTTCATGCTTCATTTTCTTCTAATAATTCTATCATACCCTTGAGTTCTTCCAATCATCAATTACCAAAAAATATGGCAATATCACCTCAAACATTCCCAACTACTAAACCACCTTCATCAGAAACGGCGTCGTTTATCACCCCAAATATCACTAACTTTAACCTCCTCCATTCTCTTTTACACCTCACAAATCAAATATGTTCATTAAACGCAGCTCCATGGTGTCGTTTCCTTTTAAACAAAATTTCTTCCTCCACTATACGTAAAACGCACCTCCTCGGTGTCGTTTTCGATGACCTAATTCGAAATTCAGTTTCGATATCAGTTTCATCTTCGAATTCAACTCGTCAAAATTCTTATGTTCTTTGTTTAGAAGAAATGTATATTGTGCTTCATAGGATTAAAACTCTGCTCGAAGATTGTTCTAATGGAAGCAAATTCTCTATTCTTATGCAAATTGAAACTGTTGCTGATAATTTCAACAAATTAACAGGTGAATTATCAACGCTTCTTGATGTTTTTCCAATTCAAGAAATGAACTTAAACGATGATGTATTGGAGCTTGTTGTTTTGATCAGAAAACAGTGTTCAGAAACGAAGAATTTGTTAGGTGAAGAACAAATTCATCTCCGAAACGACGTTGTTTCTGTTCTAGAAGGAATCAAGAAAGAAATTGTTCCAAAAGAGGAAAAATTATCTTCAATTTTTGAGAAATTGGAGATTTGTGATTCTTCAAGTTGTAGAAGTGAGATTGAAATTCTTCAAGAAGAAATTCAGAATCGAAACGAAGAACAATCGAAATCAGAGATTGTTGCTTTGATCGGACTCGTTCGTTACGCAAAGTGCGTTCTTTTTGGTGCGTCGACGCCGTCGTCGGGAAATGATGGCCGTTTACGGCGGAATCAGTCGTTGGAGGTGGTGGTTCCGGCGGATTACCGGTGTCCGATAAGTCTTGAACTGATGCGGGAGCCTGTCGTCGTGGCAACAGGACAGACGTACGATCGTGTTTCTATTAAGCTTTGGATGGATTCTGGACACAACACGTGTCCTAAAACAGGTCAAACCCTGGCCCACACGGAGTTAATACCTAACCATGCTTTGAGAAATATGATAGCTATTTGGTGCAAAGAACAGAAAATTCCATTTGAAGGTGAAACGGTAGCCGTTAAAGTTAACGGCGGTGTTACAAATAAGACAGCTTTGGAAGCAACAAGAATGACGGCGGCGTTTTTGGTCAACAAGTTGACGTTGACTAACGGTTCTTTAGCGTCGATGGAAGAGACAAATGGTGTCGTTTACGAGCTTCGAGTTTTGGCGAAATCAGATTCAGAGAGCCGAGCTTGTATAGCCGAAGCTGGAGCTATAGAGATTTTGGTTCAGTTTTTAAGCTATGAAGTTGGTTCGCAAAATCCGAGCCTACAAATTAATGCAGTTACAACGATATTAAATCTCTCGATACTTGAAGCAAATAAGAGAAGGATAATGGAGACTGAAGGTGTATTAAACGGTGTAGCAGAGGTTTTAAGATCGGGTGCCACGTGGGAGGCAAAGGCAAATGCGGCGGCTACCGTGTTTAGTTTAACTGGAGTGGTGCTTTTTAGGAAGCGGTTAGGTAAGAAGACACGTATCGTTAGTGGATTGGTTGAGTTGGCGAAGAATGGGCCTGAGGGTGCGAAGAGGGACGCATTGGCGGCAATTTTGCATCTTGCAGCAGATAGGGAGACAGTGGCGAGGTTGGTAGAGAGTGGGGTGGTGGAGATGACAGCGGGGATTATGGCGGTAATGCCGGAGGAGGCGGTGACGATACTTGAAGCGGTGGTTAAGCGTGGTGGATTGGTGGCGGTTGCGGCGGCTTTTGTGGGGATAAAAAAATTAGGGACGGTTTTAAGGGAGGGATCAGAGAGGGCGAGGGAGAGCGCGGCCGCGACGCTTGTGACAATGTGTAGGAAAGGTGGATCAGAGATTGTGGCGGAGCTTGCAGCGATTCACGGTGTGGAAAGGGTGATTTGGGAGTTAATGGCGGTGGGGAGTGTGAGAGGGAGGAGGAAGGCGGCGACGTTGTTGAGGATTTTACGTCGGTGGGCGGCAGGTTTGGACGGTGGTGAAACGGAGGGATTTACATCAACAAACACTTTTGTTAGTACGTCAACTACAATGGTTGTTCCAACTACAACTTCATTAGCACAGTAA 2214 0.4332 MKSHHHHLLHASFSSNNSIIPLSSSNHQLPKNMAISPQTFPTTKPPSSETASFITPNITNFNLLHSLLHLTNQICSLNAAPWCRFLLNKISSSTIRKTHLLGVVFDDLIRNSVSISVSSSNSTRQNSYVLCLEEMYIVLHRIKTLLEDCSNGSKFSILMQIETVADNFNKLTGELSTLLDVFPIQEMNLNDDVLELVVLIRKQCSETKNLLGEEQIHLRNDVVSVLEGIKKEIVPKEEKLSSIFEKLEICDSSSCRSEIEILQEEIQNRNEEQSKSEIVALIGLVRYAKCVLFGASTPSSGNDGRLRRNQSLEVVVPADYRCPISLELMREPVVVATGQTYDRVSIKLWMDSGHNTCPKTGQTLAHTELIPNHALRNMIAIWCKEQKIPFEGETVAVKVNGGVTNKTALEATRMTAAFLVNKLTLTNGSLASMEETNGVVYELRVLAKSDSESRACIAEAGAIEILVQFLSYEVGSQNPSLQINAVTTILNLSILEANKRRIMETEGVLNGVAEVLRSGATWEAKANAAATVFSLTGVVLFRKRLGKKTRIVSGLVELAKNGPEGAKRDALAAILHLAADRETVARLVESGVVEMTAGIMAVMPEEAVTILEAVVKRGGLVAVAAAFVGIKKLGTVLREGSERARESAAATLVTMCRKGGSEIVAELAAIHGVERVIWELMAVGSVRGRRKAATLLRILRRWAAGLDGGETEGFTSTNTFVSTSTTMVVPTTTSLAQ 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00851 737 Pfam Armadillo/beta-catenin-like repeat 450 493 IPR000225 GO:0005515
Mepo2g00851 737 ProSiteProfiles U-box domain profile. 315 389 IPR003613 GO:0004842|GO:0016567
Mepo2g00851 737 SUPERFAMILY ARM repeat 439 699 IPR016024 -
Mepo2g00851 737 PANTHER U BOX DOMAIN-CONTAINING 103 700 - -
Mepo2g00851 737 SMART Ubox_2 319 382 IPR003613 GO:0004842|GO:0016567
Mepo2g00851 737 SMART arm_5 450 494 IPR000225 GO:0005515
Mepo2g00851 737 Coils Coil 252 272 - -
Mepo2g00851 737 Pfam U-box domain 316 387 IPR003613 GO:0004842|GO:0016567
Mepo2g00851 737 SUPERFAMILY RING/U-box 312 389 - -
Mepo2g00851 737 Gene3D - 419 627 IPR011989 -
Mepo2g00851 737 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 389 IPR013083 -
Mepo2g00851 737 CDD RING-Ubox_PUB 317 369 IPR045210 -
Mepo2g00851 737 FunFam RING-type E3 ubiquitin transferase 314 389 - -
Mepo2g00851 737 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 461 507 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00851 Mepo-Chr2 10895962 10898551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00851 51 735 U-box Gene Family AT5G01830 52.899 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00851 - - tpra:123922727 1157.51